Hb_007497_030

Information

Type -
Description -
Location Contig7497: 82786-85947
Sequence    

Annotation

kegg
ID rcu:RCOM_1146780
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID XP_002530431.1
description mutt domain protein, putative [Ricinus communis]
swissprot
ID Q94B74
description Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
trembl
ID B9SWR2
description Mutt domain protein, putative OS=Ricinus communis GN=RCOM_1146780 PE=4 SV=1
Gene Ontology
ID GO:0000210
description nudix hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56824: 84792-85467
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007497_030 0.0 - - mutt domain protein, putative [Ricinus communis]
2 Hb_000331_700 0.0848295518 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
3 Hb_076626_010 0.0947538849 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002909_130 0.09790465 - - Uncharacterized protein isoform 1 [Theobroma cacao]
5 Hb_003549_020 0.0997953699 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000258_280 0.1021665407 - - PREDICTED: probable ran guanine nucleotide release factor [Jatropha curcas]
7 Hb_001863_400 0.1063327042 - - hypothetical protein EUGRSUZ_F03302 [Eucalyptus grandis]
8 Hb_000933_160 0.1071140039 - - PREDICTED: uncharacterized protein LOC105630505 [Jatropha curcas]
9 Hb_002344_070 0.1076452022 - - PREDICTED: proteasome subunit alpha type-6 [Jatropha curcas]
10 Hb_009384_020 0.1081882247 - - hypothetical protein JCGZ_24168 [Jatropha curcas]
11 Hb_002811_080 0.1094639831 - - hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
12 Hb_000878_020 0.1095225389 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]
13 Hb_008948_050 0.1102838673 - - hypothetical protein JCGZ_13339 [Jatropha curcas]
14 Hb_000042_260 0.1109385711 - - PREDICTED: uncharacterized protein LOC105632814 [Jatropha curcas]
15 Hb_007944_040 0.1113002489 - - 60S ribosomal protein L18aB [Hevea brasiliensis]
16 Hb_007575_070 0.1126595697 - - Histone H3.2 [Glycine soja]
17 Hb_003044_090 0.1143762198 - - PREDICTED: fruit protein pKIWI502 [Jatropha curcas]
18 Hb_000881_080 0.1149773964 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011311_010 0.1153869548 - - 60S ribosomal protein L27C [Hevea brasiliensis]
20 Hb_097007_010 0.1161154574 - - hypothetical protein CARUB_v10018269mg, partial [Capsella rubella]

Gene co-expression network

sample Hb_007497_030 Hb_007497_030 Hb_000331_700 Hb_000331_700 Hb_007497_030--Hb_000331_700 Hb_076626_010 Hb_076626_010 Hb_007497_030--Hb_076626_010 Hb_002909_130 Hb_002909_130 Hb_007497_030--Hb_002909_130 Hb_003549_020 Hb_003549_020 Hb_007497_030--Hb_003549_020 Hb_000258_280 Hb_000258_280 Hb_007497_030--Hb_000258_280 Hb_001863_400 Hb_001863_400 Hb_007497_030--Hb_001863_400 Hb_003044_090 Hb_003044_090 Hb_000331_700--Hb_003044_090 Hb_002811_080 Hb_002811_080 Hb_000331_700--Hb_002811_080 Hb_002588_010 Hb_002588_010 Hb_000331_700--Hb_002588_010 Hb_000567_410 Hb_000567_410 Hb_000331_700--Hb_000567_410 Hb_011311_010 Hb_011311_010 Hb_000331_700--Hb_011311_010 Hb_010672_070 Hb_010672_070 Hb_076626_010--Hb_010672_070 Hb_005590_020 Hb_005590_020 Hb_076626_010--Hb_005590_020 Hb_002999_050 Hb_002999_050 Hb_076626_010--Hb_002999_050 Hb_000933_160 Hb_000933_160 Hb_076626_010--Hb_000933_160 Hb_001158_230 Hb_001158_230 Hb_076626_010--Hb_001158_230 Hb_003893_050 Hb_003893_050 Hb_076626_010--Hb_003893_050 Hb_172221_010 Hb_172221_010 Hb_002909_130--Hb_172221_010 Hb_000042_260 Hb_000042_260 Hb_002909_130--Hb_000042_260 Hb_000329_020 Hb_000329_020 Hb_002909_130--Hb_000329_020 Hb_001085_270 Hb_001085_270 Hb_002909_130--Hb_001085_270 Hb_002909_130--Hb_001158_230 Hb_008948_050 Hb_008948_050 Hb_002909_130--Hb_008948_050 Hb_000236_460 Hb_000236_460 Hb_003549_020--Hb_000236_460 Hb_000645_190 Hb_000645_190 Hb_003549_020--Hb_000645_190 Hb_097007_010 Hb_097007_010 Hb_003549_020--Hb_097007_010 Hb_002320_060 Hb_002320_060 Hb_003549_020--Hb_002320_060 Hb_004007_180 Hb_004007_180 Hb_003549_020--Hb_004007_180 Hb_002344_070 Hb_002344_070 Hb_000258_280--Hb_002344_070 Hb_000258_280--Hb_003549_020 Hb_001386_050 Hb_001386_050 Hb_000258_280--Hb_001386_050 Hb_000878_020 Hb_000878_020 Hb_000258_280--Hb_000878_020 Hb_004735_050 Hb_004735_050 Hb_000258_280--Hb_004735_050 Hb_003994_040 Hb_003994_040 Hb_001863_400--Hb_003994_040 Hb_001248_080 Hb_001248_080 Hb_001863_400--Hb_001248_080 Hb_001141_030 Hb_001141_030 Hb_001863_400--Hb_001141_030 Hb_003203_040 Hb_003203_040 Hb_001863_400--Hb_003203_040 Hb_003455_040 Hb_003455_040 Hb_001863_400--Hb_003455_040 Hb_001863_400--Hb_076626_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.498476 0.391937 0.534356 0.440615 0.840458 1.11264
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.88607 5.61835 1.6435 0.489248 0.547666

CAGE analysis