Hb_007508_090

Information

Type -
Description -
Location Contig7508: 64924-68587
Sequence    

Annotation

kegg
ID rcu:RCOM_1469700
description protein binding protein, putative
nr
ID XP_012080385.1
description PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067K548
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11727 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56843: 68526-68660 , PASA_asmbl_56844: 69121-69464
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007508_090 0.0 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
2 Hb_000230_390 0.0602455131 - - PREDICTED: F-box/kelch-repeat protein At3g23880 [Jatropha curcas]
3 Hb_003371_090 0.0670862246 - - PREDICTED: uncharacterized protein LOC105650336 [Jatropha curcas]
4 Hb_007532_030 0.0675157804 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
5 Hb_000710_060 0.0705256031 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105645554 isoform X2 [Jatropha curcas]
6 Hb_000189_560 0.0716829152 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
7 Hb_000213_100 0.0875609992 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Jatropha curcas]
8 Hb_001159_110 0.0877075523 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
9 Hb_001014_030 0.0916097196 - - ATP binding protein, putative [Ricinus communis]
10 Hb_003761_010 0.0924351761 - - alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_002450_020 0.0942969241 - - PREDICTED: probable transcriptional regulator SLK2 [Jatropha curcas]
12 Hb_000185_030 0.0956576647 - - PREDICTED: arginine-glutamic acid dipeptide repeats protein-like isoform X2 [Jatropha curcas]
13 Hb_002218_010 0.0963818355 transcription factor TF Family: Orphans ethylene receptor, putative [Ricinus communis]
14 Hb_001205_240 0.0977294213 - - PREDICTED: uncharacterized protein LOC105645528 [Jatropha curcas]
15 Hb_000840_250 0.0986492189 - - PREDICTED: autophagy-related protein 13 [Jatropha curcas]
16 Hb_001633_210 0.0997268226 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
17 Hb_000041_100 0.1000157899 - - PREDICTED: zinc finger CCCH domain-containing protein 41 [Jatropha curcas]
18 Hb_000614_250 0.1002056361 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
19 Hb_032278_030 0.100630848 - - protein phosphatase 2c, putative [Ricinus communis]
20 Hb_004453_050 0.1011697145 - - PREDICTED: uncharacterized protein LOC105637675 [Jatropha curcas]

Gene co-expression network

sample Hb_007508_090 Hb_007508_090 Hb_000230_390 Hb_000230_390 Hb_007508_090--Hb_000230_390 Hb_003371_090 Hb_003371_090 Hb_007508_090--Hb_003371_090 Hb_007532_030 Hb_007532_030 Hb_007508_090--Hb_007532_030 Hb_000710_060 Hb_000710_060 Hb_007508_090--Hb_000710_060 Hb_000189_560 Hb_000189_560 Hb_007508_090--Hb_000189_560 Hb_000213_100 Hb_000213_100 Hb_007508_090--Hb_000213_100 Hb_000840_250 Hb_000840_250 Hb_000230_390--Hb_000840_250 Hb_001159_110 Hb_001159_110 Hb_000230_390--Hb_001159_110 Hb_000230_390--Hb_007532_030 Hb_001014_030 Hb_001014_030 Hb_000230_390--Hb_001014_030 Hb_000230_390--Hb_003371_090 Hb_000041_100 Hb_000041_100 Hb_003371_090--Hb_000041_100 Hb_003371_090--Hb_000213_100 Hb_002450_020 Hb_002450_020 Hb_003371_090--Hb_002450_020 Hb_003371_090--Hb_000710_060 Hb_000297_010 Hb_000297_010 Hb_003371_090--Hb_000297_010 Hb_009178_030 Hb_009178_030 Hb_007532_030--Hb_009178_030 Hb_002218_010 Hb_002218_010 Hb_007532_030--Hb_002218_010 Hb_004907_110 Hb_004907_110 Hb_007532_030--Hb_004907_110 Hb_008725_260 Hb_008725_260 Hb_007532_030--Hb_008725_260 Hb_007532_030--Hb_000189_560 Hb_000185_030 Hb_000185_030 Hb_000710_060--Hb_000185_030 Hb_000049_210 Hb_000049_210 Hb_000710_060--Hb_000049_210 Hb_008770_030 Hb_008770_030 Hb_000710_060--Hb_008770_030 Hb_001633_210 Hb_001633_210 Hb_000710_060--Hb_001633_210 Hb_000710_060--Hb_000297_010 Hb_001205_240 Hb_001205_240 Hb_000710_060--Hb_001205_240 Hb_000866_220 Hb_000866_220 Hb_000189_560--Hb_000866_220 Hb_000189_560--Hb_000185_030 Hb_000189_560--Hb_000710_060 Hb_004355_020 Hb_004355_020 Hb_000189_560--Hb_004355_020 Hb_022250_090 Hb_022250_090 Hb_000213_100--Hb_022250_090 Hb_000213_100--Hb_002218_010 Hb_000206_240 Hb_000206_240 Hb_000213_100--Hb_000206_240 Hb_000213_100--Hb_007532_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.78693 11.7511 3.16012 7.14515 4.16787 7.44569
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.4277 9.62859 12.6251 7.06908 5.95833

CAGE analysis