Hb_007545_120

Information

Type -
Description -
Location Contig7545: 59568-68165
Sequence    

Annotation

kegg
ID cit:102612193
description NADH--cytochrome b5 reductase 1-like
nr
ID AAV69019.1
description NADH:cytochrome b5 reductase [Vernicia fordii]
swissprot
ID Q9ZNT1
description NADH--cytochrome b5 reductase 1 OS=Arabidopsis thaliana GN=CBR1 PE=1 SV=1
trembl
ID Q5PY86
description NADH:cytochrome b5 reductase OS=Vernicia fordii GN=CBR1A PE=2 SV=1
Gene Ontology
ID GO:0005783
description nadh--cytochrome b5 reductase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56995: 59710-68065
cDNA
(Sanger)
(ID:Location)		 019_F17.ab1: 66171-68065

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007545_120 0.0 - - NADH:cytochrome b5 reductase [Vernicia fordii]
2 Hb_009193_090 0.0701703946 - - PREDICTED: protein root UVB sensitive 3 isoform X1 [Jatropha curcas]
3 Hb_001660_100 0.0997419422 - - PREDICTED: glyoxylate reductase/hydroxypyruvate reductase [Jatropha curcas]
4 Hb_001104_230 0.1013941478 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
5 Hb_001104_100 0.103973873 - - RecName: Full=Enolase 2; AltName: Full=2-phospho-D-glycerate hydro-lyase 2; AltName: Full=2-phosphoglycerate dehydratase 2; AltName: Allergen=Hev b 9 [Hevea brasiliensis]
6 Hb_002217_350 0.1105874408 - - PREDICTED: importin subunit alpha-4-like [Jatropha curcas]
7 Hb_001633_080 0.1115423897 - - PREDICTED: V-type proton ATPase subunit C [Gossypium raimondii]
8 Hb_006570_160 0.1117621952 - - PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Jatropha curcas]
9 Hb_000853_150 0.1130692315 - - Fumarase 1 isoform 2 [Theobroma cacao]
10 Hb_010407_140 0.1142537469 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
11 Hb_000260_470 0.1168620805 - - PREDICTED: uncharacterized protein LOC105649044 [Jatropha curcas]
12 Hb_011282_060 0.1177767048 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase 1 [Jatropha curcas]
13 Hb_002676_120 0.1210176424 - - hypothetical protein POPTR_0002s23750g [Populus trichocarpa]
14 Hb_001482_050 0.1226922894 - - COR413-PM2, putative [Ricinus communis]
15 Hb_062537_010 0.1228793749 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
16 Hb_000329_060 0.1229516966 - - chloroplast 5-enolpyruvylshikimate 3-phosphate synthase [Hevea brasiliensis]
17 Hb_001828_180 0.1238656144 - - 26S proteasome regulatory subunit S3, putative [Ricinus communis]
18 Hb_004429_090 0.1240168974 - - PREDICTED: ras GTPase-activating protein-binding protein 1-like isoform X1 [Jatropha curcas]
19 Hb_000483_310 0.1240457425 - - PREDICTED: WD-40 repeat-containing protein MSI4-like [Jatropha curcas]
20 Hb_005271_040 0.1245304932 - - PREDICTED: serine racemase [Jatropha curcas]

Gene co-expression network

sample Hb_007545_120 Hb_007545_120 Hb_009193_090 Hb_009193_090 Hb_007545_120--Hb_009193_090 Hb_001660_100 Hb_001660_100 Hb_007545_120--Hb_001660_100 Hb_001104_230 Hb_001104_230 Hb_007545_120--Hb_001104_230 Hb_001104_100 Hb_001104_100 Hb_007545_120--Hb_001104_100 Hb_002217_350 Hb_002217_350 Hb_007545_120--Hb_002217_350 Hb_001633_080 Hb_001633_080 Hb_007545_120--Hb_001633_080 Hb_009193_090--Hb_001633_080 Hb_002676_120 Hb_002676_120 Hb_009193_090--Hb_002676_120 Hb_002686_200 Hb_002686_200 Hb_009193_090--Hb_002686_200 Hb_159809_070 Hb_159809_070 Hb_009193_090--Hb_159809_070 Hb_006570_160 Hb_006570_160 Hb_009193_090--Hb_006570_160 Hb_000260_470 Hb_000260_470 Hb_001660_100--Hb_000260_470 Hb_005271_040 Hb_005271_040 Hb_001660_100--Hb_005271_040 Hb_000853_150 Hb_000853_150 Hb_001660_100--Hb_000853_150 Hb_001369_300 Hb_001369_300 Hb_001660_100--Hb_001369_300 Hb_000663_060 Hb_000663_060 Hb_001660_100--Hb_000663_060 Hb_001828_180 Hb_001828_180 Hb_001660_100--Hb_001828_180 Hb_000025_190 Hb_000025_190 Hb_001104_230--Hb_000025_190 Hb_004429_090 Hb_004429_090 Hb_001104_230--Hb_004429_090 Hb_001221_020 Hb_001221_020 Hb_001104_230--Hb_001221_020 Hb_003776_060 Hb_003776_060 Hb_001104_230--Hb_003776_060 Hb_062537_010 Hb_062537_010 Hb_001104_230--Hb_062537_010 Hb_004880_150 Hb_004880_150 Hb_001104_230--Hb_004880_150 Hb_000115_150 Hb_000115_150 Hb_001104_100--Hb_000115_150 Hb_001085_240 Hb_001085_240 Hb_001104_100--Hb_001085_240 Hb_002675_140 Hb_002675_140 Hb_001104_100--Hb_002675_140 Hb_001104_100--Hb_001104_230 Hb_000094_210 Hb_000094_210 Hb_001104_100--Hb_000094_210 Hb_002093_060 Hb_002093_060 Hb_001104_100--Hb_002093_060 Hb_002217_350--Hb_000853_150 Hb_000783_010 Hb_000783_010 Hb_002217_350--Hb_000783_010 Hb_000483_260 Hb_000483_260 Hb_002217_350--Hb_000483_260 Hb_002205_090 Hb_002205_090 Hb_002217_350--Hb_002205_090 Hb_003304_020 Hb_003304_020 Hb_002217_350--Hb_003304_020 Hb_000720_040 Hb_000720_040 Hb_002217_350--Hb_000720_040 Hb_003998_040 Hb_003998_040 Hb_001633_080--Hb_003998_040 Hb_010407_140 Hb_010407_140 Hb_001633_080--Hb_010407_140 Hb_003988_050 Hb_003988_050 Hb_001633_080--Hb_003988_050 Hb_001957_010 Hb_001957_010 Hb_001633_080--Hb_001957_010 Hb_001633_080--Hb_062537_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
39.115 27.4884 96.0857 117.719 42.9577 46.9023
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
60.6985 61.7744 67.8678 139.891 36.1399

CAGE analysis