Hb_007546_010

Information

Type -
Description -
Location Contig7546: 1881-14185
Sequence    

Annotation

kegg
ID rcu:RCOM_0011200
description Cationic peroxidase 1 precursor, putative (EC:1.11.1.7)
nr
ID CBI39655.3
description unnamed protein product [Vitis vinifera]
swissprot
ID A7QEU4
description Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2
trembl
ID A0A0E0K823
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007546_010 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_000997_130 0.0838985564 - - DNA binding protein, putative [Ricinus communis]
3 Hb_002066_050 0.0847986921 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
4 Hb_046610_010 0.0890098096 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_164577_010 0.0936125743 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_001511_200 0.0953928723 - - Embryonic abundant protein, putative [Ricinus communis]
7 Hb_008637_020 0.0982310288 - - conserved hypothetical protein [Ricinus communis]
8 Hb_128851_020 0.0987680219 - - ankyrin repeat-containing protein, putative [Ricinus communis]
9 Hb_002289_180 0.1029365473 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
10 Hb_000164_160 0.1056551652 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
11 Hb_000714_080 0.112614359 transcription factor TF Family: Trihelix GT-2 factor [Glycine max]
12 Hb_000904_110 0.1127925909 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Eucalyptus grandis]
13 Hb_000665_090 0.1132622073 - - conserved hypothetical protein [Ricinus communis]
14 Hb_099188_010 0.1141890999 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_002133_010 0.1213078826 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
16 Hb_000668_220 0.1230171359 - - PREDICTED: uncharacterized protein LOC105119281 [Populus euphratica]
17 Hb_116103_010 0.1244186999 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
18 Hb_054165_010 0.1301432878 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
19 Hb_001677_140 0.1319213813 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
20 Hb_173029_010 0.1327071948 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_007546_010 Hb_007546_010 Hb_000997_130 Hb_000997_130 Hb_007546_010--Hb_000997_130 Hb_002066_050 Hb_002066_050 Hb_007546_010--Hb_002066_050 Hb_046610_010 Hb_046610_010 Hb_007546_010--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_007546_010--Hb_164577_010 Hb_001511_200 Hb_001511_200 Hb_007546_010--Hb_001511_200 Hb_008637_020 Hb_008637_020 Hb_007546_010--Hb_008637_020 Hb_002289_180 Hb_002289_180 Hb_000997_130--Hb_002289_180 Hb_000997_130--Hb_046610_010 Hb_000997_130--Hb_164577_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_010223_010 Hb_010223_010 Hb_000997_130--Hb_010223_010 Hb_000665_090 Hb_000665_090 Hb_002066_050--Hb_000665_090 Hb_000925_110 Hb_000925_110 Hb_002066_050--Hb_000925_110 Hb_000714_080 Hb_000714_080 Hb_002066_050--Hb_000714_080 Hb_000627_130 Hb_000627_130 Hb_002066_050--Hb_000627_130 Hb_000904_110 Hb_000904_110 Hb_002066_050--Hb_000904_110 Hb_054165_010 Hb_054165_010 Hb_046610_010--Hb_054165_010 Hb_046610_010--Hb_164577_010 Hb_001002_020 Hb_001002_020 Hb_046610_010--Hb_001002_020 Hb_021142_030 Hb_021142_030 Hb_046610_010--Hb_021142_030 Hb_164577_010--Hb_008637_020 Hb_164577_010--Hb_002289_180 Hb_000819_020 Hb_000819_020 Hb_164577_010--Hb_000819_020 Hb_128851_020 Hb_128851_020 Hb_001511_200--Hb_128851_020 Hb_001677_140 Hb_001677_140 Hb_001511_200--Hb_001677_140 Hb_010136_020 Hb_010136_020 Hb_001511_200--Hb_010136_020 Hb_002006_110 Hb_002006_110 Hb_001511_200--Hb_002006_110 Hb_099188_010 Hb_099188_010 Hb_001511_200--Hb_099188_010 Hb_000668_220 Hb_000668_220 Hb_001511_200--Hb_000668_220 Hb_008637_020--Hb_128851_020 Hb_008637_020--Hb_099188_010 Hb_008637_020--Hb_002289_180 Hb_002542_030 Hb_002542_030 Hb_008637_020--Hb_002542_030 Hb_008637_020--Hb_001511_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.99785 2.7432 1.5066 0.010458 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0394216

CAGE analysis