Hb_007558_010

Information

Type -
Description -
Location Contig7558: 6835-7155
Sequence    

Annotation

kegg
ID rcu:RCOM_0542340
description hypothetical protein
nr
ID XP_012085235.1
description PREDICTED: mitochondrial import receptor subunit TOM9-2 [Jatropha curcas]
swissprot
ID Q9FNC9
description Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana GN=TOM9-2 PE=1 SV=3
trembl
ID A0A067K3T4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17632 PE=4 SV=1
Gene Ontology
ID GO:0005741
description mitochondrial import receptor subunit tom9-2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57026: 7580-10295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007558_010 0.0 - - PREDICTED: mitochondrial import receptor subunit TOM9-2 [Jatropha curcas]
2 Hb_001951_260 0.094121532 - - 60S ribosomal protein L32, putative [Ricinus communis]
3 Hb_005535_050 0.106322989 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
4 Hb_001504_070 0.1083649529 - - PREDICTED: 60S ribosomal protein L7-1 [Jatropha curcas]
5 Hb_011828_050 0.1140132539 - - 40S ribosomal protein S23, putative [Ricinus communis]
6 Hb_007441_210 0.115933126 - - hypothetical protein PRUPE_ppa013350mg [Prunus persica]
7 Hb_019962_030 0.1182108895 - - PREDICTED: uncharacterized protein LOC105650622 [Jatropha curcas]
8 Hb_000084_290 0.1183256526 - - mitochondrial 39S ribosomal protein L53 [Hevea brasiliensis]
9 Hb_042083_050 0.1188136384 - - 60S ribosomal protein L11, putative [Ricinus communis]
10 Hb_001178_100 0.1196510279 - - 60S acidic ribosomal protein P2-4 [Theobroma cacao]
11 Hb_000933_180 0.1209783796 - - PREDICTED: chorismate mutase 3, chloroplastic [Jatropha curcas]
12 Hb_025236_040 0.1210956551 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000742_140 0.1217214416 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001405_050 0.1223284502 - - PREDICTED: uncharacterized protein LOC100500641 [Glycine max]
15 Hb_007007_050 0.1239550151 - - PREDICTED: ubiquitin-related modifier 1 homolog 2 [Malus domestica]
16 Hb_000000_160 0.1239789248 - - PREDICTED: membrin-11 [Jatropha curcas]
17 Hb_002498_180 0.1240362416 - - PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Jatropha curcas]
18 Hb_001369_650 0.1244379474 - - PREDICTED: chloride conductance regulatory protein ICln [Jatropha curcas]
19 Hb_000244_300 0.1245896955 - - PREDICTED: probable 39S ribosomal protein L17, mitochondrial [Jatropha curcas]
20 Hb_001047_100 0.1251726833 - - 40S ribosomal protein S18, putative [Ricinus communis]

Gene co-expression network

sample Hb_007558_010 Hb_007558_010 Hb_001951_260 Hb_001951_260 Hb_007558_010--Hb_001951_260 Hb_005535_050 Hb_005535_050 Hb_007558_010--Hb_005535_050 Hb_001504_070 Hb_001504_070 Hb_007558_010--Hb_001504_070 Hb_011828_050 Hb_011828_050 Hb_007558_010--Hb_011828_050 Hb_007441_210 Hb_007441_210 Hb_007558_010--Hb_007441_210 Hb_019962_030 Hb_019962_030 Hb_007558_010--Hb_019962_030 Hb_025236_040 Hb_025236_040 Hb_001951_260--Hb_025236_040 Hb_000290_020 Hb_000290_020 Hb_001951_260--Hb_000290_020 Hb_004032_060 Hb_004032_060 Hb_001951_260--Hb_004032_060 Hb_000084_290 Hb_000084_290 Hb_001951_260--Hb_000084_290 Hb_001047_100 Hb_001047_100 Hb_001951_260--Hb_001047_100 Hb_005535_050--Hb_019962_030 Hb_010128_130 Hb_010128_130 Hb_005535_050--Hb_010128_130 Hb_000473_040 Hb_000473_040 Hb_005535_050--Hb_000473_040 Hb_001369_650 Hb_001369_650 Hb_005535_050--Hb_001369_650 Hb_143766_090 Hb_143766_090 Hb_005535_050--Hb_143766_090 Hb_005332_070 Hb_005332_070 Hb_005535_050--Hb_005332_070 Hb_007007_050 Hb_007007_050 Hb_001504_070--Hb_007007_050 Hb_000976_270 Hb_000976_270 Hb_001504_070--Hb_000976_270 Hb_001504_070--Hb_010128_130 Hb_001504_070--Hb_019962_030 Hb_001504_070--Hb_005535_050 Hb_043302_010 Hb_043302_010 Hb_011828_050--Hb_043302_010 Hb_009767_120 Hb_009767_120 Hb_011828_050--Hb_009767_120 Hb_003746_040 Hb_003746_040 Hb_011828_050--Hb_003746_040 Hb_004944_010 Hb_004944_010 Hb_011828_050--Hb_004944_010 Hb_000742_140 Hb_000742_140 Hb_011828_050--Hb_000742_140 Hb_003874_020 Hb_003874_020 Hb_011828_050--Hb_003874_020 Hb_013405_060 Hb_013405_060 Hb_007441_210--Hb_013405_060 Hb_028841_030 Hb_028841_030 Hb_007441_210--Hb_028841_030 Hb_004363_010 Hb_004363_010 Hb_007441_210--Hb_004363_010 Hb_021419_020 Hb_021419_020 Hb_007441_210--Hb_021419_020 Hb_007441_210--Hb_000742_140 Hb_007441_210--Hb_000084_290 Hb_000666_110 Hb_000666_110 Hb_019962_030--Hb_000666_110 Hb_019962_030--Hb_007007_050 Hb_004722_060 Hb_004722_060 Hb_019962_030--Hb_004722_060 Hb_001898_230 Hb_001898_230 Hb_019962_030--Hb_001898_230 Hb_001504_150 Hb_001504_150 Hb_019962_030--Hb_001504_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
178.115 55.1253 77.7765 32.0568 110.956 155.39
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
83.5048 185.083 38.1995 42.018 8.00413

CAGE analysis