Hb_007558_130

Information

Type -
Description -
Location Contig7558: 86060-86678
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007558_130 0.0 - - -
2 Hb_000834_070 0.2102025356 - - PREDICTED: tankyrase-1 isoform X4 [Jatropha curcas]
3 Hb_004024_020 0.2278855337 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_030627_010 0.238086785 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 [Sesamum indicum]
5 Hb_004102_010 0.2504679435 - - F-box family protein [Theobroma cacao]
6 Hb_000062_210 0.2731714765 - - PREDICTED: BAHD acyltransferase At5g47980-like [Pyrus x bretschneideri]
7 Hb_012490_020 0.277200307 - - PREDICTED: protein phosphatase 2C 77 [Jatropha curcas]
8 Hb_003197_010 0.2867800948 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000445_120 0.2989256699 - - ATP binding protein, putative [Ricinus communis]
10 Hb_005154_080 0.3023523095 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640764 [Jatropha curcas]
11 Hb_017358_070 0.3026289992 - - snf1-kinase beta subunit, plants, putative [Ricinus communis]
12 Hb_000525_070 0.3029849195 - - PREDICTED: WAT1-related protein At5g40240-like [Jatropha curcas]
13 Hb_005779_020 0.3086891086 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000329_580 0.309606793 - - malate dehydrogenase, putative [Ricinus communis]
15 Hb_047418_010 0.3138280147 transcription factor TF Family: MYB PREDICTED: myb-related protein P [Jatropha curcas]
16 Hb_000264_040 0.315302681 - - sugar transporter, putative [Ricinus communis]
17 Hb_000879_230 0.3154683683 - - PREDICTED: tetratricopeptide repeat protein 7A [Jatropha curcas]
18 Hb_002886_010 0.3162529576 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000128_030 0.3165374142 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001294_030 0.3172706068 - - PREDICTED: uncharacterized protein LOC105644307 [Jatropha curcas]

Gene co-expression network

sample Hb_007558_130 Hb_007558_130 Hb_000834_070 Hb_000834_070 Hb_007558_130--Hb_000834_070 Hb_004024_020 Hb_004024_020 Hb_007558_130--Hb_004024_020 Hb_030627_010 Hb_030627_010 Hb_007558_130--Hb_030627_010 Hb_004102_010 Hb_004102_010 Hb_007558_130--Hb_004102_010 Hb_000062_210 Hb_000062_210 Hb_007558_130--Hb_000062_210 Hb_012490_020 Hb_012490_020 Hb_007558_130--Hb_012490_020 Hb_001300_250 Hb_001300_250 Hb_000834_070--Hb_001300_250 Hb_003197_010 Hb_003197_010 Hb_000834_070--Hb_003197_010 Hb_001728_120 Hb_001728_120 Hb_000834_070--Hb_001728_120 Hb_000834_070--Hb_004102_010 Hb_002073_110 Hb_002073_110 Hb_000834_070--Hb_002073_110 Hb_019613_010 Hb_019613_010 Hb_004024_020--Hb_019613_010 Hb_000879_230 Hb_000879_230 Hb_004024_020--Hb_000879_230 Hb_001307_110 Hb_001307_110 Hb_004024_020--Hb_001307_110 Hb_000445_120 Hb_000445_120 Hb_004024_020--Hb_000445_120 Hb_001269_070 Hb_001269_070 Hb_004024_020--Hb_001269_070 Hb_001098_030 Hb_001098_030 Hb_004024_020--Hb_001098_030 Hb_030627_010--Hb_000062_210 Hb_000128_030 Hb_000128_030 Hb_030627_010--Hb_000128_030 Hb_000796_130 Hb_000796_130 Hb_030627_010--Hb_000796_130 Hb_002183_080 Hb_002183_080 Hb_030627_010--Hb_002183_080 Hb_003540_100 Hb_003540_100 Hb_030627_010--Hb_003540_100 Hb_004102_010--Hb_003197_010 Hb_000365_370 Hb_000365_370 Hb_004102_010--Hb_000365_370 Hb_017358_070 Hb_017358_070 Hb_004102_010--Hb_017358_070 Hb_000389_050 Hb_000389_050 Hb_004102_010--Hb_000389_050 Hb_000107_510 Hb_000107_510 Hb_004102_010--Hb_000107_510 Hb_000062_210--Hb_000128_030 Hb_000062_210--Hb_000796_130 Hb_000525_070 Hb_000525_070 Hb_000062_210--Hb_000525_070 Hb_003026_040 Hb_003026_040 Hb_000062_210--Hb_003026_040 Hb_000763_040 Hb_000763_040 Hb_000062_210--Hb_000763_040 Hb_000416_030 Hb_000416_030 Hb_012490_020--Hb_000416_030 Hb_000500_050 Hb_000500_050 Hb_012490_020--Hb_000500_050 Hb_001294_030 Hb_001294_030 Hb_012490_020--Hb_001294_030 Hb_001755_030 Hb_001755_030 Hb_012490_020--Hb_001755_030 Hb_001269_470 Hb_001269_470 Hb_012490_020--Hb_001269_470 Hb_000191_080 Hb_000191_080 Hb_012490_020--Hb_000191_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.665522 0.526262 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.649683 0.365646 0 1.21014

CAGE analysis