Hb_007575_020

Information

Type -
Description -
Location Contig7575: 18432-43917
Sequence    

Annotation

kegg
ID rcu:RCOM_1596820
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_002510498.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID O65782
description Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1
trembl
ID B9R855
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1596820 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 83b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007575_020 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000269_040 0.1106139519 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_004899_210 0.1173461306 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
4 Hb_045785_010 0.1189565233 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
5 Hb_000289_090 0.139671954 - - -
6 Hb_008642_050 0.1409615887 - - -
7 Hb_017640_010 0.1464138852 - - hypothetical protein JCGZ_18815 [Jatropha curcas]
8 Hb_003900_040 0.1556149588 - - hypothetical protein [Lotus japonicus]
9 Hb_001205_170 0.1585201759 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
10 Hb_119832_010 0.1604312356 - - -
11 Hb_005852_010 0.162697868 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
12 Hb_172426_010 0.1645502798 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
13 Hb_027337_050 0.1714835474 - - polyprotein [Citrus endogenous pararetrovirus]
14 Hb_144027_010 0.1726839269 - - -
15 Hb_094694_010 0.1782340651 - - -
16 Hb_151411_010 0.178739039 - - -
17 Hb_000248_020 0.1808099014 - - PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
18 Hb_000060_130 0.1808367352 - - -
19 Hb_000209_010 0.1811433366 - - -
20 Hb_039547_010 0.1832804781 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_007575_020 Hb_007575_020 Hb_000269_040 Hb_000269_040 Hb_007575_020--Hb_000269_040 Hb_004899_210 Hb_004899_210 Hb_007575_020--Hb_004899_210 Hb_045785_010 Hb_045785_010 Hb_007575_020--Hb_045785_010 Hb_000289_090 Hb_000289_090 Hb_007575_020--Hb_000289_090 Hb_008642_050 Hb_008642_050 Hb_007575_020--Hb_008642_050 Hb_017640_010 Hb_017640_010 Hb_007575_020--Hb_017640_010 Hb_005852_010 Hb_005852_010 Hb_000269_040--Hb_005852_010 Hb_094694_010 Hb_094694_010 Hb_000269_040--Hb_094694_010 Hb_001174_050 Hb_001174_050 Hb_000269_040--Hb_001174_050 Hb_000248_020 Hb_000248_020 Hb_000269_040--Hb_000248_020 Hb_151411_010 Hb_151411_010 Hb_000269_040--Hb_151411_010 Hb_003900_040 Hb_003900_040 Hb_004899_210--Hb_003900_040 Hb_144027_010 Hb_144027_010 Hb_004899_210--Hb_144027_010 Hb_001250_030 Hb_001250_030 Hb_004899_210--Hb_001250_030 Hb_004899_210--Hb_008642_050 Hb_004899_210--Hb_017640_010 Hb_045785_010--Hb_008642_050 Hb_045785_010--Hb_004899_210 Hb_045785_010--Hb_017640_010 Hb_003169_040 Hb_003169_040 Hb_045785_010--Hb_003169_040 Hb_045785_010--Hb_003900_040 Hb_012796_030 Hb_012796_030 Hb_000289_090--Hb_012796_030 Hb_003440_080 Hb_003440_080 Hb_000289_090--Hb_003440_080 Hb_004994_200 Hb_004994_200 Hb_000289_090--Hb_004994_200 Hb_010863_070 Hb_010863_070 Hb_000289_090--Hb_010863_070 Hb_119832_010 Hb_119832_010 Hb_000289_090--Hb_119832_010 Hb_004372_050 Hb_004372_050 Hb_000289_090--Hb_004372_050 Hb_058095_030 Hb_058095_030 Hb_008642_050--Hb_058095_030 Hb_008642_050--Hb_094694_010 Hb_039547_010 Hb_039547_010 Hb_008642_050--Hb_039547_010 Hb_000916_010 Hb_000916_010 Hb_008642_050--Hb_000916_010 Hb_007575_010 Hb_007575_010 Hb_017640_010--Hb_007575_010 Hb_144838_010 Hb_144838_010 Hb_017640_010--Hb_144838_010 Hb_000672_130 Hb_000672_130 Hb_017640_010--Hb_000672_130 Hb_099878_040 Hb_099878_040 Hb_017640_010--Hb_099878_040 Hb_008680_010 Hb_008680_010 Hb_017640_010--Hb_008680_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.427814 0.0314434 0.0287113 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0685894 0.794713

CAGE analysis