Hb_007579_030

Information

Type -
Description -
Location Contig7579: 17042-20583
Sequence    

Annotation

kegg
ID rcu:RCOM_1584500
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002510008.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q9SGP2
description Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1
trembl
ID B9R6R5
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_1584500 PE=3 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57151: 17671-17942 , PASA_asmbl_57152: 18117-18439
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007579_030 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_001680_050 0.062803063 - - -
3 Hb_001401_120 0.0738108038 - - hypothetical protein JCGZ_04273 [Jatropha curcas]
4 Hb_029665_010 0.0773991488 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
5 Hb_001366_300 0.0786034717 - - GERMIN-LIKE protein 10 [Populus trichocarpa]
6 Hb_029238_040 0.0791640903 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
7 Hb_000197_260 0.0831315689 - - hypothetical protein PRUPE_ppa025448mg [Prunus persica]
8 Hb_148262_010 0.0897886884 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000000_260 0.0926447435 - - PREDICTED: probable galacturonosyltransferase-like 1 [Jatropha curcas]
10 Hb_152914_010 0.0928461101 - - PREDICTED: polcalcin Syr v 3-like [Nicotiana sylvestris]
11 Hb_000368_040 0.0933375382 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_000983_130 0.0940362387 - - transcription factor, putative [Ricinus communis]
13 Hb_000317_170 0.096654078 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
14 Hb_180980_010 0.0994294648 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Malus domestica]
15 Hb_000856_030 0.1014668373 - - ATP binding protein, putative [Ricinus communis]
16 Hb_026124_020 0.101931874 - - PREDICTED: uncharacterized protein LOC105644241 isoform X1 [Jatropha curcas]
17 Hb_156850_050 0.1029470072 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
18 Hb_000012_380 0.1035086225 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
19 Hb_011381_050 0.1039986809 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
20 Hb_004102_200 0.1044230175 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_007579_030 Hb_007579_030 Hb_001680_050 Hb_001680_050 Hb_007579_030--Hb_001680_050 Hb_001401_120 Hb_001401_120 Hb_007579_030--Hb_001401_120 Hb_029665_010 Hb_029665_010 Hb_007579_030--Hb_029665_010 Hb_001366_300 Hb_001366_300 Hb_007579_030--Hb_001366_300 Hb_029238_040 Hb_029238_040 Hb_007579_030--Hb_029238_040 Hb_000197_260 Hb_000197_260 Hb_007579_030--Hb_000197_260 Hb_000317_170 Hb_000317_170 Hb_001680_050--Hb_000317_170 Hb_001680_050--Hb_029665_010 Hb_000368_040 Hb_000368_040 Hb_001680_050--Hb_000368_040 Hb_001680_050--Hb_000197_260 Hb_000856_030 Hb_000856_030 Hb_001680_050--Hb_000856_030 Hb_148262_010 Hb_148262_010 Hb_001401_120--Hb_148262_010 Hb_009117_020 Hb_009117_020 Hb_001401_120--Hb_009117_020 Hb_026124_020 Hb_026124_020 Hb_001401_120--Hb_026124_020 Hb_001401_120--Hb_029238_040 Hb_001401_120--Hb_001366_300 Hb_029665_010--Hb_000197_260 Hb_029665_010--Hb_000368_040 Hb_005183_070 Hb_005183_070 Hb_029665_010--Hb_005183_070 Hb_029665_010--Hb_001401_120 Hb_077774_010 Hb_077774_010 Hb_001366_300--Hb_077774_010 Hb_001366_300--Hb_026124_020 Hb_001366_300--Hb_148262_010 Hb_000983_130 Hb_000983_130 Hb_001366_300--Hb_000983_130 Hb_156850_050 Hb_156850_050 Hb_029238_040--Hb_156850_050 Hb_004102_200 Hb_004102_200 Hb_029238_040--Hb_004102_200 Hb_029238_040--Hb_000983_130 Hb_004450_090 Hb_004450_090 Hb_029238_040--Hb_004450_090 Hb_000197_260--Hb_005183_070 Hb_152914_010 Hb_152914_010 Hb_000197_260--Hb_152914_010 Hb_002186_110 Hb_002186_110 Hb_000197_260--Hb_002186_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.14599 0.408495 4.39694 0.0228262 0.00506129
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0368882 2.09909

CAGE analysis