Hb_007590_030

Information

Type -
Description -
Location Contig7590: 17686-18825
Sequence    

Annotation

kegg
ID rcu:RCOM_0612220
description hypothetical protein
nr
ID XP_012067628.1
description PREDICTED: iridoid synthase [Jatropha curcas]
swissprot
ID Q9STX2
description 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1
trembl
ID A0A067LNQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08472 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007590_030 0.0 - - PREDICTED: iridoid synthase [Jatropha curcas]
2 Hb_000193_090 0.092272324 - - cysteine protease, putative [Ricinus communis]
3 Hb_002447_100 0.1028616102 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
4 Hb_001221_250 0.1091786654 - - -
5 Hb_125181_010 0.109651592 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
6 Hb_004530_010 0.1291039459 - - PREDICTED: uncharacterized protein LOC104898079 [Beta vulgaris subsp. vulgaris]
7 Hb_112791_030 0.1305519345 - - Uncharacterized protein TCM_027940 [Theobroma cacao]
8 Hb_145080_010 0.1355022925 - - PREDICTED: uncharacterized protein LOC105643750 [Jatropha curcas]
9 Hb_004291_060 0.1404801824 - - hypothetical protein F775_42457 [Aegilops tauschii]
10 Hb_011358_010 0.141087544 - - -
11 Hb_044380_010 0.1449336535 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Malus domestica]
12 Hb_007295_020 0.156093468 - - Uncharacterized protein TCM_034658 [Theobroma cacao]
13 Hb_003714_030 0.157528897 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
14 Hb_019925_010 0.160899562 - - PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
15 Hb_155423_010 0.1733201468 - - -
16 Hb_005092_070 0.1800464049 - - Oligopeptide transporter, putative [Ricinus communis]
17 Hb_000914_010 0.1815241714 - - hypothetical protein POPTR_0025s00760g [Populus trichocarpa]
18 Hb_006351_120 0.1830763699 - - hypothetical protein CICLE_v10030803mg [Citrus clementina]
19 Hb_000207_240 0.1844127545 - - hypothetical protein RCOM_0686540 [Ricinus communis]
20 Hb_051410_010 0.1851072005 - - PREDICTED: uncharacterized protein LOC103401813 [Malus domestica]

Gene co-expression network

sample Hb_007590_030 Hb_007590_030 Hb_000193_090 Hb_000193_090 Hb_007590_030--Hb_000193_090 Hb_002447_100 Hb_002447_100 Hb_007590_030--Hb_002447_100 Hb_001221_250 Hb_001221_250 Hb_007590_030--Hb_001221_250 Hb_125181_010 Hb_125181_010 Hb_007590_030--Hb_125181_010 Hb_004530_010 Hb_004530_010 Hb_007590_030--Hb_004530_010 Hb_112791_030 Hb_112791_030 Hb_007590_030--Hb_112791_030 Hb_000193_090--Hb_001221_250 Hb_000193_090--Hb_125181_010 Hb_004291_060 Hb_004291_060 Hb_000193_090--Hb_004291_060 Hb_011358_010 Hb_011358_010 Hb_000193_090--Hb_011358_010 Hb_000193_090--Hb_112791_030 Hb_155423_010 Hb_155423_010 Hb_002447_100--Hb_155423_010 Hb_002447_100--Hb_112791_030 Hb_001542_010 Hb_001542_010 Hb_002447_100--Hb_001542_010 Hb_145080_010 Hb_145080_010 Hb_002447_100--Hb_145080_010 Hb_002447_100--Hb_011358_010 Hb_001221_250--Hb_125181_010 Hb_019925_010 Hb_019925_010 Hb_001221_250--Hb_019925_010 Hb_001221_250--Hb_004291_060 Hb_044380_010 Hb_044380_010 Hb_001221_250--Hb_044380_010 Hb_125181_010--Hb_019925_010 Hb_125181_010--Hb_044380_010 Hb_006351_120 Hb_006351_120 Hb_125181_010--Hb_006351_120 Hb_102761_010 Hb_102761_010 Hb_004530_010--Hb_102761_010 Hb_004530_010--Hb_044380_010 Hb_010721_040 Hb_010721_040 Hb_004530_010--Hb_010721_040 Hb_000997_370 Hb_000997_370 Hb_004530_010--Hb_000997_370 Hb_003714_030 Hb_003714_030 Hb_004530_010--Hb_003714_030 Hb_001248_140 Hb_001248_140 Hb_004530_010--Hb_001248_140 Hb_112791_030--Hb_145080_010 Hb_112791_030--Hb_011358_010 Hb_011432_010 Hb_011432_010 Hb_112791_030--Hb_011432_010 Hb_037519_010 Hb_037519_010 Hb_112791_030--Hb_037519_010 Hb_002973_130 Hb_002973_130 Hb_112791_030--Hb_002973_130 Hb_007295_020 Hb_007295_020 Hb_112791_030--Hb_007295_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0188818 0 0.0749861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0272211 0.210115

CAGE analysis