Hb_007590_070

Information

Type -
Description -
Location Contig7590: 37554-40989
Sequence    

Annotation

kegg
ID rcu:RCOM_0612460
description kinase, putative
nr
ID XP_012067592.1
description PREDICTED: inositol 3-kinase [Jatropha curcas]
swissprot
ID Q93Z01
description Inositol 3-kinase OS=Arabidopsis thaliana GN=At5g58730 PE=2 SV=1
trembl
ID A0A067LDL1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08469 PE=4 SV=1
Gene Ontology
ID GO:0005524
description inositol 3-kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57170: 39218-39533
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007590_070 0.0 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
2 Hb_134469_010 0.1308404182 - - PREDICTED: protein argonaute 5 isoform X1 [Jatropha curcas]
3 Hb_090855_010 0.1329753566 - - Disease resistance protein RPS5, putative [Ricinus communis]
4 Hb_010874_020 0.1565004228 - - PREDICTED: uncharacterized protein LOC105636745 [Jatropha curcas]
5 Hb_000733_210 0.1565013084 - - putative serine/threonine protein phosphatase [Angiostrongylus costaricensis]
6 Hb_000193_140 0.1600715639 - - conserved hypothetical protein [Ricinus communis]
7 Hb_010427_010 0.1634142525 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06191 [Jatropha curcas]
8 Hb_006472_020 0.1659145057 - - heat shock protein [Cicer arietinum]
9 Hb_010029_020 0.1685720613 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
10 Hb_073562_010 0.1735398358 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
11 Hb_000432_060 0.1754051853 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_001427_070 0.1754424932 - - PREDICTED: xaa-Pro dipeptidase [Jatropha curcas]
13 Hb_005976_050 0.1757410099 - - PREDICTED: protein RALF-like 34 [Jatropha curcas]
14 Hb_011311_020 0.1771311009 - - PREDICTED: myosin-11 isoform X2 [Jatropha curcas]
15 Hb_164898_010 0.1778215267 - - Cysteine-rich protein, putative [Theobroma cacao]
16 Hb_000189_110 0.1792320343 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04750, mitochondrial [Jatropha curcas]
17 Hb_003020_050 0.1836666812 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_004032_380 0.1850737083 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
19 Hb_168697_010 0.1865483457 - - hypothetical protein JCGZ_16772 [Jatropha curcas]
20 Hb_007064_010 0.1865739437 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]

Gene co-expression network

sample Hb_007590_070 Hb_007590_070 Hb_134469_010 Hb_134469_010 Hb_007590_070--Hb_134469_010 Hb_090855_010 Hb_090855_010 Hb_007590_070--Hb_090855_010 Hb_010874_020 Hb_010874_020 Hb_007590_070--Hb_010874_020 Hb_000733_210 Hb_000733_210 Hb_007590_070--Hb_000733_210 Hb_000193_140 Hb_000193_140 Hb_007590_070--Hb_000193_140 Hb_010427_010 Hb_010427_010 Hb_007590_070--Hb_010427_010 Hb_001427_070 Hb_001427_070 Hb_134469_010--Hb_001427_070 Hb_134469_010--Hb_000733_210 Hb_009701_010 Hb_009701_010 Hb_134469_010--Hb_009701_010 Hb_011311_020 Hb_011311_020 Hb_134469_010--Hb_011311_020 Hb_000140_480 Hb_000140_480 Hb_134469_010--Hb_000140_480 Hb_090855_010--Hb_010874_020 Hb_000230_080 Hb_000230_080 Hb_090855_010--Hb_000230_080 Hb_001930_010 Hb_001930_010 Hb_090855_010--Hb_001930_010 Hb_001439_140 Hb_001439_140 Hb_090855_010--Hb_001439_140 Hb_000206_250 Hb_000206_250 Hb_090855_010--Hb_000206_250 Hb_168697_010 Hb_168697_010 Hb_010874_020--Hb_168697_010 Hb_006938_080 Hb_006938_080 Hb_010874_020--Hb_006938_080 Hb_002276_130 Hb_002276_130 Hb_010874_020--Hb_002276_130 Hb_000000_370 Hb_000000_370 Hb_010874_020--Hb_000000_370 Hb_012490_080 Hb_012490_080 Hb_010874_020--Hb_012490_080 Hb_001617_050 Hb_001617_050 Hb_010874_020--Hb_001617_050 Hb_002666_020 Hb_002666_020 Hb_000733_210--Hb_002666_020 Hb_002007_240 Hb_002007_240 Hb_000733_210--Hb_002007_240 Hb_000733_210--Hb_001427_070 Hb_001636_020 Hb_001636_020 Hb_000733_210--Hb_001636_020 Hb_000193_140--Hb_010427_010 Hb_007064_010 Hb_007064_010 Hb_000193_140--Hb_007064_010 Hb_000189_110 Hb_000189_110 Hb_000193_140--Hb_000189_110 Hb_000193_140--Hb_090855_010 Hb_004137_060 Hb_004137_060 Hb_000193_140--Hb_004137_060 Hb_000574_070 Hb_000574_070 Hb_000193_140--Hb_000574_070 Hb_006660_010 Hb_006660_010 Hb_010427_010--Hb_006660_010 Hb_003449_070 Hb_003449_070 Hb_010427_010--Hb_003449_070 Hb_011310_160 Hb_011310_160 Hb_010427_010--Hb_011310_160 Hb_000212_310 Hb_000212_310 Hb_010427_010--Hb_000212_310 Hb_003294_090 Hb_003294_090 Hb_010427_010--Hb_003294_090 Hb_005679_050 Hb_005679_050 Hb_010427_010--Hb_005679_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.4067 9.23851 1.77093 4.79976 5.24382 7.57537
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.99487 2.17606 15.4896 16.4495 4.93748

CAGE analysis