Hb_007594_110

Information

Type -
Description -
Location Contig7594: 80163-84588
Sequence    

Annotation

kegg
ID rcu:RCOM_1612960
description fructokinase, putative (EC:2.7.1.4)
nr
ID AJK93569.1
description fructokinase [Manihot esculenta]
swissprot
ID Q9FLH8
description Probable fructokinase-7 OS=Arabidopsis thaliana GN=At5g51830 PE=1 SV=1
trembl
ID A0A0C5AX07
description FRK6 protein OS=Manihot esculenta GN=FRK6 PE=2 SV=1
Gene Ontology
ID GO:0016773
description probable fructokinase-7 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57196: 82320-84472 , PASA_asmbl_57197: 83034-84453
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007594_110 0.0 - - fructokinase [Manihot esculenta]
2 Hb_002759_040 0.1374830837 - - BnaA09g29830D [Brassica napus]
3 Hb_000163_110 0.1744369901 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
4 Hb_000963_090 0.1903067284 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea brasiliensis]
5 Hb_000329_080 0.1957729995 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
6 Hb_009620_060 0.1992916991 - - PREDICTED: acetylornithine aminotransferase, mitochondrial-like [Jatropha curcas]
7 Hb_000108_250 0.2019182342 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Jatropha curcas]
8 Hb_010632_010 0.2044833415 - - PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Jatropha curcas]
9 Hb_000914_190 0.2064239914 - - xanthine dehydrogenase, putative [Ricinus communis]
10 Hb_002811_190 0.2064896514 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
11 Hb_001811_080 0.2077777419 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
12 Hb_166127_030 0.208379455 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_004712_200 0.2105172348 - - hypothetical protein CICLE_v10010292mg [Citrus clementina]
14 Hb_000977_150 0.2108407246 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
15 Hb_000997_290 0.2114137694 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
16 Hb_106070_010 0.2129276855 - - PREDICTED: uncharacterized protein LOC105793196 [Gossypium raimondii]
17 Hb_067664_010 0.2133847783 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
18 Hb_005977_060 0.2189765258 - - conserved hypothetical protein [Ricinus communis]
19 Hb_011287_070 0.2203688919 - - -
20 Hb_000966_040 0.22047935 - - hypothetical protein JCGZ_01642 [Jatropha curcas]

Gene co-expression network

sample Hb_007594_110 Hb_007594_110 Hb_002759_040 Hb_002759_040 Hb_007594_110--Hb_002759_040 Hb_000163_110 Hb_000163_110 Hb_007594_110--Hb_000163_110 Hb_000963_090 Hb_000963_090 Hb_007594_110--Hb_000963_090 Hb_000329_080 Hb_000329_080 Hb_007594_110--Hb_000329_080 Hb_009620_060 Hb_009620_060 Hb_007594_110--Hb_009620_060 Hb_000108_250 Hb_000108_250 Hb_007594_110--Hb_000108_250 Hb_002759_040--Hb_000329_080 Hb_002759_040--Hb_000163_110 Hb_004724_260 Hb_004724_260 Hb_002759_040--Hb_004724_260 Hb_006370_050 Hb_006370_050 Hb_002759_040--Hb_006370_050 Hb_062013_010 Hb_062013_010 Hb_002759_040--Hb_062013_010 Hb_000163_110--Hb_000329_080 Hb_001365_020 Hb_001365_020 Hb_000163_110--Hb_001365_020 Hb_001365_010 Hb_001365_010 Hb_000163_110--Hb_001365_010 Hb_000441_050 Hb_000441_050 Hb_000163_110--Hb_000441_050 Hb_005977_060 Hb_005977_060 Hb_000163_110--Hb_005977_060 Hb_000300_680 Hb_000300_680 Hb_000163_110--Hb_000300_680 Hb_010632_010 Hb_010632_010 Hb_000963_090--Hb_010632_010 Hb_078477_060 Hb_078477_060 Hb_000963_090--Hb_078477_060 Hb_000963_090--Hb_000329_080 Hb_002811_190 Hb_002811_190 Hb_000963_090--Hb_002811_190 Hb_001811_080 Hb_001811_080 Hb_000963_090--Hb_001811_080 Hb_001080_150 Hb_001080_150 Hb_000963_090--Hb_001080_150 Hb_000329_080--Hb_001365_010 Hb_001195_370 Hb_001195_370 Hb_000329_080--Hb_001195_370 Hb_000329_080--Hb_000300_680 Hb_000329_080--Hb_001811_080 Hb_000977_150 Hb_000977_150 Hb_000329_080--Hb_000977_150 Hb_003226_190 Hb_003226_190 Hb_009620_060--Hb_003226_190 Hb_000014_190 Hb_000014_190 Hb_009620_060--Hb_000014_190 Hb_000189_520 Hb_000189_520 Hb_009620_060--Hb_000189_520 Hb_002671_130 Hb_002671_130 Hb_009620_060--Hb_002671_130 Hb_000032_400 Hb_000032_400 Hb_009620_060--Hb_000032_400 Hb_007904_040 Hb_007904_040 Hb_009620_060--Hb_007904_040 Hb_000122_260 Hb_000122_260 Hb_000108_250--Hb_000122_260 Hb_010098_040 Hb_010098_040 Hb_000108_250--Hb_010098_040 Hb_004837_100 Hb_004837_100 Hb_000108_250--Hb_004837_100 Hb_000684_200 Hb_000684_200 Hb_000108_250--Hb_000684_200 Hb_002636_030 Hb_002636_030 Hb_000108_250--Hb_002636_030 Hb_000803_170 Hb_000803_170 Hb_000108_250--Hb_000803_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.113131 0.158612 0.491243 0.295329 0 0.039872
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.207353 0 0.0749516 0.508486 1.58261

CAGE analysis