Hb_007632_090

Information

Type -
Description -
Location Contig7632: 82460-86539
Sequence    

Annotation

kegg
ID rcu:RCOM_0521840
description nicotinamide mononucleotide adenylyltransferase, putative (EC:2.7.7.1)
nr
ID XP_012070996.1
description PREDICTED: nicotinamide/nicotinic acid mononucleotide adenylyltransferase isoform X1 [Jatropha curcas]
swissprot
ID F4K687
description Nicotinamide/nicotinic acid mononucleotide adenylyltransferase OS=Arabidopsis thaliana GN=NMNAT PE=2 SV=1
trembl
ID A0A067KSU7
description Nicotinamide-nucleotide adenylyltransferase OS=Jatropha curcas GN=JCGZ_01023 PE=3 SV=1
Gene Ontology
ID GO:0000309
description nicotinamide nicotinic acid mononucleotide adenylyltransferase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57354: 82943-86177 , PASA_asmbl_57355: 82920-84678 , PASA_asmbl_57356: 82950-84678
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007632_090 0.0 - - PREDICTED: nicotinamide/nicotinic acid mononucleotide adenylyltransferase isoform X1 [Jatropha curcas]
2 Hb_003125_040 0.0848961957 - - PREDICTED: uncharacterized protein LOC105640201 isoform X1 [Jatropha curcas]
3 Hb_000997_060 0.1019396524 - - PREDICTED: DNA repair protein XRCC4 [Jatropha curcas]
4 Hb_005389_150 0.1033512906 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001009_040 0.1035180011 - - PREDICTED: mitochondrial pyruvate carrier 1 [Jatropha curcas]
6 Hb_000617_320 0.1038269371 - - 40S ribosomal protein S21B [Hevea brasiliensis]
7 Hb_007441_340 0.1048185942 - - protein with unknown function [Ricinus communis]
8 Hb_000316_110 0.1058105676 - - Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
9 Hb_003106_130 0.1074320204 - - PREDICTED: uncharacterized protein LOC105640436 [Jatropha curcas]
10 Hb_008406_160 0.1076077492 - - PREDICTED: ADP,ATP carrier protein 3, mitochondrial [Jatropha curcas]
11 Hb_004117_290 0.1076647081 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003086_110 0.1079757398 - - PREDICTED: dihydroneopterin aldolase-like isoform X2 [Prunus mume]
13 Hb_000169_010 0.1086055179 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Jatropha curcas]
14 Hb_000723_090 0.1099987605 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000621_060 0.1104230628 - - PREDICTED: zinc transporter 5 [Jatropha curcas]
16 Hb_001329_220 0.110514301 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002942_020 0.1112840173 - - nucleotide binding protein, putative [Ricinus communis]
18 Hb_000622_100 0.111501511 - - PREDICTED: pre-rRNA-processing protein RIX1-like [Jatropha curcas]
19 Hb_002400_220 0.1115295088 - - Vesicle-associated membrane protein, putative [Ricinus communis]
20 Hb_007632_250 0.1120756349 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007632_090 Hb_007632_090 Hb_003125_040 Hb_003125_040 Hb_007632_090--Hb_003125_040 Hb_000997_060 Hb_000997_060 Hb_007632_090--Hb_000997_060 Hb_005389_150 Hb_005389_150 Hb_007632_090--Hb_005389_150 Hb_001009_040 Hb_001009_040 Hb_007632_090--Hb_001009_040 Hb_000617_320 Hb_000617_320 Hb_007632_090--Hb_000617_320 Hb_007441_340 Hb_007441_340 Hb_007632_090--Hb_007441_340 Hb_002942_020 Hb_002942_020 Hb_003125_040--Hb_002942_020 Hb_060809_010 Hb_060809_010 Hb_003125_040--Hb_060809_010 Hb_006569_020 Hb_006569_020 Hb_003125_040--Hb_006569_020 Hb_000928_240 Hb_000928_240 Hb_003125_040--Hb_000928_240 Hb_000317_430 Hb_000317_430 Hb_003125_040--Hb_000317_430 Hb_118419_020 Hb_118419_020 Hb_003125_040--Hb_118419_020 Hb_000258_410 Hb_000258_410 Hb_000997_060--Hb_000258_410 Hb_002232_170 Hb_002232_170 Hb_000997_060--Hb_002232_170 Hb_008406_160 Hb_008406_160 Hb_000997_060--Hb_008406_160 Hb_015941_030 Hb_015941_030 Hb_000997_060--Hb_015941_030 Hb_123475_010 Hb_123475_010 Hb_000997_060--Hb_123475_010 Hb_000272_100 Hb_000272_100 Hb_000997_060--Hb_000272_100 Hb_003266_050 Hb_003266_050 Hb_005389_150--Hb_003266_050 Hb_005389_150--Hb_001009_040 Hb_000169_010 Hb_000169_010 Hb_005389_150--Hb_000169_010 Hb_003011_040 Hb_003011_040 Hb_005389_150--Hb_003011_040 Hb_001269_320 Hb_001269_320 Hb_005389_150--Hb_001269_320 Hb_010691_060 Hb_010691_060 Hb_005389_150--Hb_010691_060 Hb_001009_040--Hb_000169_010 Hb_000808_040 Hb_000808_040 Hb_001009_040--Hb_000808_040 Hb_061908_010 Hb_061908_010 Hb_001009_040--Hb_061908_010 Hb_001158_220 Hb_001158_220 Hb_001009_040--Hb_001158_220 Hb_001009_040--Hb_008406_160 Hb_007166_050 Hb_007166_050 Hb_000617_320--Hb_007166_050 Hb_001019_090 Hb_001019_090 Hb_000617_320--Hb_001019_090 Hb_007632_250 Hb_007632_250 Hb_000617_320--Hb_007632_250 Hb_118977_020 Hb_118977_020 Hb_000617_320--Hb_118977_020 Hb_003086_110 Hb_003086_110 Hb_000617_320--Hb_003086_110 Hb_004297_100 Hb_004297_100 Hb_000617_320--Hb_004297_100 Hb_000172_120 Hb_000172_120 Hb_007441_340--Hb_000172_120 Hb_004096_170 Hb_004096_170 Hb_007441_340--Hb_004096_170 Hb_003453_020 Hb_003453_020 Hb_007441_340--Hb_003453_020 Hb_002400_220 Hb_002400_220 Hb_007441_340--Hb_002400_220 Hb_001269_150 Hb_001269_150 Hb_007441_340--Hb_001269_150 Hb_007441_340--Hb_000258_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.1109 4.05322 7.6221 10.7069 32.7488 36.9189
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.1707 28.4458 11.5335 11.3586 2.50994

CAGE analysis