Hb_007632_130

Information

Type -
Description -
Location Contig7632: 144787-148234
Sequence    

Annotation

kegg
ID pop:POPTR_0001s37670g
description POPTRDRAFT_642311; MutT/nudix family protein
nr
ID XP_012071006.1
description PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
swissprot
ID Q6NPD7
description Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1
trembl
ID A0A067L5C0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01026 PE=3 SV=1
Gene Ontology
ID GO:0000210
description nudix hydrolase 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007632_130 0.0 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
2 Hb_032260_130 0.1040556267 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
3 Hb_006846_030 0.1082744063 - - respiratory burst oxidase A [Manihot esculenta]
4 Hb_019026_050 0.1109135356 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000120_320 0.1180518188 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_002553_070 0.1183817066 - - PREDICTED: RING-H2 finger protein ATL16 [Jatropha curcas]
7 Hb_164117_010 0.122052749 - - hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
8 Hb_000127_080 0.123161057 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
9 Hb_000181_260 0.1257288127 - - PREDICTED: uncharacterized protein LOC105139156 [Populus euphratica]
10 Hb_004893_010 0.1263347598 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
11 Hb_003847_050 0.1291571123 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
12 Hb_023956_010 0.1302588874 - - glutathione s-transferase, putative [Ricinus communis]
13 Hb_007625_030 0.1316299674 - - unknown [Medicago truncatula]
14 Hb_004079_100 0.1317430556 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
15 Hb_012787_050 0.1326555873 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
16 Hb_085315_010 0.1333406819 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
17 Hb_000956_070 0.1352679296 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
18 Hb_002236_010 0.1359937241 - - PREDICTED: bidirectional sugar transporter SWEET4 [Jatropha curcas]
19 Hb_002448_020 0.1373617521 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
20 Hb_135720_010 0.1408790663 - - hypothetical protein JCGZ_17857 [Jatropha curcas]

Gene co-expression network

sample Hb_007632_130 Hb_007632_130 Hb_032260_130 Hb_032260_130 Hb_007632_130--Hb_032260_130 Hb_006846_030 Hb_006846_030 Hb_007632_130--Hb_006846_030 Hb_019026_050 Hb_019026_050 Hb_007632_130--Hb_019026_050 Hb_000120_320 Hb_000120_320 Hb_007632_130--Hb_000120_320 Hb_002553_070 Hb_002553_070 Hb_007632_130--Hb_002553_070 Hb_164117_010 Hb_164117_010 Hb_007632_130--Hb_164117_010 Hb_032260_130--Hb_164117_010 Hb_004893_010 Hb_004893_010 Hb_032260_130--Hb_004893_010 Hb_000115_290 Hb_000115_290 Hb_032260_130--Hb_000115_290 Hb_116194_010 Hb_116194_010 Hb_032260_130--Hb_116194_010 Hb_002374_520 Hb_002374_520 Hb_032260_130--Hb_002374_520 Hb_003847_050 Hb_003847_050 Hb_006846_030--Hb_003847_050 Hb_012787_050 Hb_012787_050 Hb_006846_030--Hb_012787_050 Hb_023956_010 Hb_023956_010 Hb_006846_030--Hb_023956_010 Hb_001568_010 Hb_001568_010 Hb_006846_030--Hb_001568_010 Hb_002448_020 Hb_002448_020 Hb_006846_030--Hb_002448_020 Hb_006846_030--Hb_019026_050 Hb_019026_050--Hb_003847_050 Hb_019026_050--Hb_023956_010 Hb_019026_050--Hb_002553_070 Hb_019026_050--Hb_000120_320 Hb_149055_010 Hb_149055_010 Hb_000120_320--Hb_149055_010 Hb_000181_260 Hb_000181_260 Hb_000120_320--Hb_000181_260 Hb_001677_090 Hb_001677_090 Hb_000120_320--Hb_001677_090 Hb_002641_140 Hb_002641_140 Hb_000120_320--Hb_002641_140 Hb_001138_070 Hb_001138_070 Hb_000120_320--Hb_001138_070 Hb_002236_010 Hb_002236_010 Hb_002553_070--Hb_002236_010 Hb_002553_070--Hb_023956_010 Hb_000571_060 Hb_000571_060 Hb_002553_070--Hb_000571_060 Hb_005679_120 Hb_005679_120 Hb_002553_070--Hb_005679_120 Hb_002553_070--Hb_006846_030 Hb_085315_010 Hb_085315_010 Hb_164117_010--Hb_085315_010 Hb_164117_010--Hb_004893_010 Hb_164117_010--Hb_116194_010 Hb_164117_010--Hb_019026_050 Hb_000127_080 Hb_000127_080 Hb_164117_010--Hb_000127_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.08006 1.52395 6.72458 0.0162568 0.216315
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0396223 0.031168 0 4.31843 2.58297

CAGE analysis