Hb_007645_110

Information

Type transcription factor
Description TF Family: ERF
Location Contig7645: 117135-118187
Sequence    

Annotation

kegg
ID rcu:RCOM_0089590
description hypothetical protein
nr
ID XP_002526723.1
description hypothetical protein RCOM_0089590 [Ricinus communis]
swissprot
ID Q9SVX5
description Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1
trembl
ID B9SL54
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0089590 PE=4 SV=1
Gene Ontology
ID GO:0005634
description dehydration-responsive element-binding protein 2f-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007645_110 0.0 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
2 Hb_007654_010 0.1618901703 - - valacyclovir hydrolase, putative [Ricinus communis]
3 Hb_001789_010 0.1749821715 - - hypothetical protein POPTR_0015s13020g [Populus trichocarpa]
4 Hb_142734_020 0.1805984816 - - PREDICTED: uncharacterized protein LOC105764710 isoform X1 [Gossypium raimondii]
5 Hb_002553_100 0.1810584605 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
6 Hb_000705_100 0.1882484219 - - glutathione s-transferase, putative [Ricinus communis]
7 Hb_174514_010 0.1907020746 - - flavin-containing monooxygenase family protein [Populus trichocarpa]
8 Hb_111985_120 0.1988684858 - - dihydroflavonol-4-reductase [Vitis rotundifolia]
9 Hb_002805_260 0.2059967715 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002081_220 0.207302181 - - PREDICTED: uncharacterized protein LOC103707552 [Phoenix dactylifera]
11 Hb_163720_010 0.2091924737 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]
12 Hb_073174_010 0.2091940236 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
13 Hb_000329_240 0.2091950524 transcription factor TF Family: PLATZ zinc ion binding protein, putative [Ricinus communis]
14 Hb_001900_040 0.2091974579 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
15 Hb_011444_050 0.2091981684 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
16 Hb_000518_010 0.2091983209 transcription factor TF Family: MYB hypothetical protein POPTR_0010s17300g [Populus trichocarpa]
17 Hb_188247_020 0.2092000023 - - hypothetical protein, partial [Cecembia lonarensis]
18 Hb_150093_010 0.2092019998 - - putative polyprotein [Oryza sativa Japonica Group]
19 Hb_002326_160 0.2092036991 - - hypothetical protein JCGZ_04332 [Jatropha curcas]
20 Hb_001240_030 0.2092077526 - - PREDICTED: uncharacterized protein LOC105634453 [Jatropha curcas]

Gene co-expression network

sample Hb_007645_110 Hb_007645_110 Hb_007654_010 Hb_007654_010 Hb_007645_110--Hb_007654_010 Hb_001789_010 Hb_001789_010 Hb_007645_110--Hb_001789_010 Hb_142734_020 Hb_142734_020 Hb_007645_110--Hb_142734_020 Hb_002553_100 Hb_002553_100 Hb_007645_110--Hb_002553_100 Hb_000705_100 Hb_000705_100 Hb_007645_110--Hb_000705_100 Hb_174514_010 Hb_174514_010 Hb_007645_110--Hb_174514_010 Hb_002805_260 Hb_002805_260 Hb_007654_010--Hb_002805_260 Hb_007017_110 Hb_007017_110 Hb_007654_010--Hb_007017_110 Hb_007451_080 Hb_007451_080 Hb_007654_010--Hb_007451_080 Hb_004316_160 Hb_004316_160 Hb_007654_010--Hb_004316_160 Hb_007951_080 Hb_007951_080 Hb_007654_010--Hb_007951_080 Hb_111985_120 Hb_111985_120 Hb_001789_010--Hb_111985_120 Hb_111693_010 Hb_111693_010 Hb_001789_010--Hb_111693_010 Hb_001377_480 Hb_001377_480 Hb_001789_010--Hb_001377_480 Hb_000220_170 Hb_000220_170 Hb_001789_010--Hb_000220_170 Hb_187211_010 Hb_187211_010 Hb_001789_010--Hb_187211_010 Hb_001789_010--Hb_002553_100 Hb_048308_010 Hb_048308_010 Hb_142734_020--Hb_048308_010 Hb_005211_110 Hb_005211_110 Hb_142734_020--Hb_005211_110 Hb_008764_010 Hb_008764_010 Hb_142734_020--Hb_008764_010 Hb_001246_150 Hb_001246_150 Hb_142734_020--Hb_001246_150 Hb_142734_020--Hb_174514_010 Hb_002553_100--Hb_000220_170 Hb_002553_100--Hb_111985_120 Hb_002553_100--Hb_111693_010 Hb_001006_200 Hb_001006_200 Hb_002553_100--Hb_001006_200 Hb_002553_100--Hb_174514_010 Hb_129204_050 Hb_129204_050 Hb_000705_100--Hb_129204_050 Hb_000705_060 Hb_000705_060 Hb_000705_100--Hb_000705_060 Hb_000215_420 Hb_000215_420 Hb_000705_100--Hb_000215_420 Hb_000705_090 Hb_000705_090 Hb_000705_100--Hb_000705_090 Hb_001101_020 Hb_001101_020 Hb_000705_100--Hb_001101_020 Hb_001775_050 Hb_001775_050 Hb_000705_100--Hb_001775_050 Hb_089843_010 Hb_089843_010 Hb_174514_010--Hb_089843_010 Hb_003086_180 Hb_003086_180 Hb_174514_010--Hb_003086_180 Hb_023774_010 Hb_023774_010 Hb_174514_010--Hb_023774_010 Hb_000613_270 Hb_000613_270 Hb_174514_010--Hb_000613_270 Hb_047923_010 Hb_047923_010 Hb_174514_010--Hb_047923_010 Hb_001652_050 Hb_001652_050 Hb_174514_010--Hb_001652_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.176762 1.19226 0.0353276 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.09633 0

CAGE analysis