Hb_007691_030

Information

Type desease resistance
Description Gene Name: AAA
Location Contig7691: 30137-39571
Sequence    

Annotation

kegg
ID tcc:TCM_015477
description P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1
nr
ID XP_012081080.1
description PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
swissprot
ID B4F6J6
description ATPase family AAA domain-containing protein 1 OS=Xenopus tropicalis GN=atad1 PE=2 SV=2
trembl
ID A0A067K278
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18153 PE=3 SV=1
Gene Ontology
ID GO:0005524
description atpase family aaa domain-containing protein 1-b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57548: 30182-39513
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007691_030 0.0 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
2 Hb_003428_030 0.049051158 - - tRNA, putative [Ricinus communis]
3 Hb_005144_160 0.0514743134 - - PREDICTED: uncharacterized protein LOC105628018 isoform X1 [Jatropha curcas]
4 Hb_002739_100 0.0515487706 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Jatropha curcas]
5 Hb_000876_070 0.0545249029 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
6 Hb_003092_040 0.0559692884 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 isoform X2 [Pyrus x bretschneideri]
7 Hb_000580_180 0.0565411147 - - conserved hypothetical protein [Ricinus communis]
8 Hb_032202_190 0.0574062393 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 21 [Gossypium raimondii]
9 Hb_003417_020 0.0588705568 - - PREDICTED: 50S ribosomal protein L13, chloroplastic [Jatropha curcas]
10 Hb_000563_320 0.0599336821 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
11 Hb_005779_060 0.0599345132 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
12 Hb_000099_080 0.0604753801 - - kinesin light chain, putative [Ricinus communis]
13 Hb_000120_790 0.0605146875 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Jatropha curcas]
14 Hb_003525_010 0.0606786819 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X1 [Populus euphratica]
15 Hb_000038_170 0.0633333211 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
16 Hb_001242_060 0.0638601539 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
17 Hb_000085_160 0.0648009351 - - hypothetical protein CICLE_v10009012mg [Citrus clementina]
18 Hb_003126_050 0.0655425293 - - PREDICTED: cell cycle checkpoint protein RAD17 isoform X1 [Jatropha curcas]
19 Hb_002200_080 0.0657681122 - - PREDICTED: uncharacterized protein C57A10.07 [Jatropha curcas]
20 Hb_005663_060 0.0657822997 - - PREDICTED: uncharacterized protein LOC105770600 [Gossypium raimondii]

Gene co-expression network

sample Hb_007691_030 Hb_007691_030 Hb_003428_030 Hb_003428_030 Hb_007691_030--Hb_003428_030 Hb_005144_160 Hb_005144_160 Hb_007691_030--Hb_005144_160 Hb_002739_100 Hb_002739_100 Hb_007691_030--Hb_002739_100 Hb_000876_070 Hb_000876_070 Hb_007691_030--Hb_000876_070 Hb_003092_040 Hb_003092_040 Hb_007691_030--Hb_003092_040 Hb_000580_180 Hb_000580_180 Hb_007691_030--Hb_000580_180 Hb_003525_010 Hb_003525_010 Hb_003428_030--Hb_003525_010 Hb_000093_160 Hb_000093_160 Hb_003428_030--Hb_000093_160 Hb_000038_170 Hb_000038_170 Hb_003428_030--Hb_000038_170 Hb_003125_120 Hb_003125_120 Hb_003428_030--Hb_003125_120 Hb_000032_270 Hb_000032_270 Hb_003428_030--Hb_000032_270 Hb_005144_160--Hb_000580_180 Hb_002200_080 Hb_002200_080 Hb_005144_160--Hb_002200_080 Hb_003177_030 Hb_003177_030 Hb_005144_160--Hb_003177_030 Hb_002863_050 Hb_002863_050 Hb_005144_160--Hb_002863_050 Hb_006634_070 Hb_006634_070 Hb_005144_160--Hb_006634_070 Hb_002739_100--Hb_000876_070 Hb_005779_060 Hb_005779_060 Hb_002739_100--Hb_005779_060 Hb_001242_060 Hb_001242_060 Hb_002739_100--Hb_001242_060 Hb_000928_210 Hb_000928_210 Hb_002739_100--Hb_000928_210 Hb_031527_040 Hb_031527_040 Hb_002739_100--Hb_031527_040 Hb_000876_070--Hb_005779_060 Hb_002046_180 Hb_002046_180 Hb_000876_070--Hb_002046_180 Hb_032202_190 Hb_032202_190 Hb_000876_070--Hb_032202_190 Hb_005618_170 Hb_005618_170 Hb_000876_070--Hb_005618_170 Hb_007416_280 Hb_007416_280 Hb_003092_040--Hb_007416_280 Hb_005663_060 Hb_005663_060 Hb_003092_040--Hb_005663_060 Hb_000510_130 Hb_000510_130 Hb_003092_040--Hb_000510_130 Hb_003092_040--Hb_032202_190 Hb_003126_050 Hb_003126_050 Hb_003092_040--Hb_003126_050 Hb_011344_210 Hb_011344_210 Hb_000580_180--Hb_011344_210 Hb_001142_030 Hb_001142_030 Hb_000580_180--Hb_001142_030 Hb_000120_670 Hb_000120_670 Hb_000580_180--Hb_000120_670 Hb_000580_180--Hb_002863_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.9714 20.5055 16.929 24.2201 31.3727 31.5847
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.1993 38.8787 31.3996 20.6719 18.2778

CAGE analysis