Hb_007709_010

Information

Type -
Description -
Location Contig7709: 3167-6002
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007709_010 0.0 - - -
2 Hb_011174_100 0.124661355 - - ubiquitin-protein ligase, putative [Ricinus communis]
3 Hb_000684_010 0.1249796435 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
4 Hb_000343_260 0.1285882778 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
5 Hb_005542_110 0.1373539105 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
6 Hb_000086_370 0.1401300644 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
7 Hb_000876_050 0.142948801 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
8 Hb_000120_980 0.1442639407 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
9 Hb_000657_030 0.1476047891 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
10 Hb_005333_100 0.1505345188 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001769_030 0.1513205476 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
12 Hb_000521_300 0.1555538105 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
13 Hb_002739_060 0.1607464866 - - -
14 Hb_152718_010 0.1617181911 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
15 Hb_004055_100 0.1626464441 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
16 Hb_001611_010 0.1628751955 - - scab resistance family protein [Populus trichocarpa]
17 Hb_002783_300 0.1631568831 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_001675_130 0.1647456771 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
19 Hb_011214_140 0.16651026 - - Ran GTPase binding protein, putative [Ricinus communis]
20 Hb_006718_040 0.1717148128 - - PREDICTED: starch synthase 3, chloroplastic/amyloplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007709_010 Hb_007709_010 Hb_011174_100 Hb_011174_100 Hb_007709_010--Hb_011174_100 Hb_000684_010 Hb_000684_010 Hb_007709_010--Hb_000684_010 Hb_000343_260 Hb_000343_260 Hb_007709_010--Hb_000343_260 Hb_005542_110 Hb_005542_110 Hb_007709_010--Hb_005542_110 Hb_000086_370 Hb_000086_370 Hb_007709_010--Hb_000086_370 Hb_000876_050 Hb_000876_050 Hb_007709_010--Hb_000876_050 Hb_011174_100--Hb_005542_110 Hb_011174_100--Hb_000876_050 Hb_000512_040 Hb_000512_040 Hb_011174_100--Hb_000512_040 Hb_001454_160 Hb_001454_160 Hb_011174_100--Hb_001454_160 Hb_011174_100--Hb_000684_010 Hb_000120_980 Hb_000120_980 Hb_000684_010--Hb_000120_980 Hb_005333_100 Hb_005333_100 Hb_000684_010--Hb_005333_100 Hb_000684_010--Hb_000876_050 Hb_000684_010--Hb_005542_110 Hb_001675_130 Hb_001675_130 Hb_000684_010--Hb_001675_130 Hb_002783_300 Hb_002783_300 Hb_000343_260--Hb_002783_300 Hb_000521_290 Hb_000521_290 Hb_000343_260--Hb_000521_290 Hb_000668_160 Hb_000668_160 Hb_000343_260--Hb_000668_160 Hb_152718_010 Hb_152718_010 Hb_000343_260--Hb_152718_010 Hb_107543_010 Hb_107543_010 Hb_000343_260--Hb_107543_010 Hb_004055_100 Hb_004055_100 Hb_005542_110--Hb_004055_100 Hb_005542_110--Hb_005333_100 Hb_005542_110--Hb_000876_050 Hb_000976_060 Hb_000976_060 Hb_005542_110--Hb_000976_060 Hb_000657_030 Hb_000657_030 Hb_000086_370--Hb_000657_030 Hb_000521_300 Hb_000521_300 Hb_000086_370--Hb_000521_300 Hb_004195_170 Hb_004195_170 Hb_000086_370--Hb_004195_170 Hb_000086_370--Hb_000120_980 Hb_000589_180 Hb_000589_180 Hb_000086_370--Hb_000589_180 Hb_012807_060 Hb_012807_060 Hb_000086_370--Hb_012807_060 Hb_000221_170 Hb_000221_170 Hb_000876_050--Hb_000221_170 Hb_000876_050--Hb_005333_100 Hb_000876_050--Hb_000120_980 Hb_010813_030 Hb_010813_030 Hb_000876_050--Hb_010813_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0750415 1.40602 0.11593 0.164051 0.0251046 0.022068
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.00092 0.366554

CAGE analysis