Hb_007718_040

Information

Type -
Description -
Location Contig7718: 26323-26697
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb025054mg
description hypothetical protein
nr
ID XP_007217477.1
description hypothetical protein PRUPE_ppb025054mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WZM5
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb017672mg PE=4 SV=1
Gene Ontology
ID GO:0003824
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007718_040 0.0 - - hypothetical protein PRUPE_ppb025054mg [Prunus persica]
2 Hb_000920_340 0.069920481 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_002764_020 0.0739145929 - - hypothetical protein JCGZ_24084 [Jatropha curcas]
4 Hb_002445_020 0.0869917211 - - -
5 Hb_001104_070 0.0871450459 - - hypothetical protein SORBIDRAFT_10g024640 [Sorghum bicolor]
6 Hb_140595_030 0.0876614151 - - -
7 Hb_189208_080 0.0973592418 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 11-like isoform X1 [Jatropha curcas]
8 Hb_080048_030 0.0997350578 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]
9 Hb_140595_020 0.1049493068 - - PREDICTED: vegetative cell wall protein gp1-like [Solanum lycopersicum]
10 Hb_001459_020 0.1059665985 - - ankyrin repeat protein [Bruguiera gymnorhiza]
11 Hb_018487_040 0.1196374527 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
12 Hb_000260_520 0.1220331075 - - receptor protein kinase, putative [Ricinus communis]
13 Hb_022832_050 0.1224778761 - - PREDICTED: protein argonaute 16 isoform X1 [Sesamum indicum]
14 Hb_002675_220 0.1225843947 - - PREDICTED: probable pyridoxal biosynthesis protein PDX1.2 [Populus euphratica]
15 Hb_018202_040 0.1228602484 - - PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Jatropha curcas]
16 Hb_000768_080 0.1241347808 - - Mlo protein [Hevea brasiliensis]
17 Hb_008727_060 0.1255345223 - - Beta-glucosidase, putative [Ricinus communis]
18 Hb_003559_010 0.1264461669 - - Peroxidase 27 precursor, putative [Ricinus communis]
19 Hb_001186_040 0.1267392852 - - Peroxidase 3 precursor, putative [Ricinus communis]
20 Hb_001105_150 0.1271775564 - - GERMIN-LIKE protein 10 [Populus trichocarpa]

Gene co-expression network

sample Hb_007718_040 Hb_007718_040 Hb_000920_340 Hb_000920_340 Hb_007718_040--Hb_000920_340 Hb_002764_020 Hb_002764_020 Hb_007718_040--Hb_002764_020 Hb_002445_020 Hb_002445_020 Hb_007718_040--Hb_002445_020 Hb_001104_070 Hb_001104_070 Hb_007718_040--Hb_001104_070 Hb_140595_030 Hb_140595_030 Hb_007718_040--Hb_140595_030 Hb_189208_080 Hb_189208_080 Hb_007718_040--Hb_189208_080 Hb_000920_340--Hb_189208_080 Hb_000920_340--Hb_140595_030 Hb_000920_340--Hb_001104_070 Hb_080048_030 Hb_080048_030 Hb_000920_340--Hb_080048_030 Hb_000920_340--Hb_002445_020 Hb_009004_020 Hb_009004_020 Hb_002764_020--Hb_009004_020 Hb_002764_020--Hb_002445_020 Hb_000768_080 Hb_000768_080 Hb_002764_020--Hb_000768_080 Hb_002764_020--Hb_000920_340 Hb_002600_110 Hb_002600_110 Hb_002764_020--Hb_002600_110 Hb_002445_020--Hb_002600_110 Hb_002445_020--Hb_000768_080 Hb_042123_010 Hb_042123_010 Hb_002445_020--Hb_042123_010 Hb_002675_220 Hb_002675_220 Hb_001104_070--Hb_002675_220 Hb_001104_070--Hb_080048_030 Hb_018487_040 Hb_018487_040 Hb_001104_070--Hb_018487_040 Hb_001104_070--Hb_189208_080 Hb_001104_070--Hb_140595_030 Hb_002250_040 Hb_002250_040 Hb_001104_070--Hb_002250_040 Hb_140595_020 Hb_140595_020 Hb_140595_030--Hb_140595_020 Hb_000155_230 Hb_000155_230 Hb_140595_030--Hb_000155_230 Hb_001105_150 Hb_001105_150 Hb_140595_030--Hb_001105_150 Hb_000260_520 Hb_000260_520 Hb_140595_030--Hb_000260_520 Hb_189208_080--Hb_002675_220 Hb_189208_080--Hb_140595_030 Hb_011214_080 Hb_011214_080 Hb_189208_080--Hb_011214_080 Hb_189208_080--Hb_000260_520
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0842874 0.0754709 0.336452 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.22124

CAGE analysis