Hb_007761_040

Information

Type -
Description -
Location Contig7761: 25385-28770
Sequence    

Annotation

kegg
ID rcu:RCOM_0723560
description carbonyl reductase, putative (EC:1.1.1.189)
nr
ID XP_002524868.1
description carbonyl reductase, putative [Ricinus communis]
swissprot
ID Q9M2E2
description (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1
trembl
ID B9SFU9
description Carbonyl reductase, putative OS=Ricinus communis GN=RCOM_0723560 PE=3 SV=1
Gene Ontology
ID GO:0050221
description (+)-neomenthol dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007761_040 0.0 - - carbonyl reductase, putative [Ricinus communis]
2 Hb_002571_110 0.0802573898 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
3 Hb_011900_030 0.1081221348 - - hypothetical protein JCGZ_13686 [Jatropha curcas]
4 Hb_014870_010 0.1168808859 - - PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
5 Hb_001935_050 0.117086742 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 [Jatropha curcas]
6 Hb_000864_040 0.1214755781 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_000084_270 0.1222068669 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
8 Hb_031862_160 0.1224139665 - - unnamed protein product [Vitis vinifera]
9 Hb_000189_610 0.1229138212 - - Late embryogenesis abundant protein D-34, putative [Ricinus communis]
10 Hb_001543_010 0.1233254167 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000186_020 0.1246984391 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]
12 Hb_010904_020 0.1255696476 - - PREDICTED: probable receptor-like protein kinase At5g39030 [Populus euphratica]
13 Hb_124540_010 0.1264981587 - - PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Populus euphratica]
14 Hb_173107_010 0.132574718 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
15 Hb_007676_090 0.1387162116 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
16 Hb_003428_020 0.1411682264 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
17 Hb_000037_210 0.1426666219 - - -
18 Hb_009083_060 0.1431621267 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
19 Hb_099335_020 0.1431667388 - - hypothetical protein ARALYDRAFT_905869 [Arabidopsis lyrata subsp. lyrata]
20 Hb_000032_120 0.1441456274 - - Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Glycine soja]

Gene co-expression network

sample Hb_007761_040 Hb_007761_040 Hb_002571_110 Hb_002571_110 Hb_007761_040--Hb_002571_110 Hb_011900_030 Hb_011900_030 Hb_007761_040--Hb_011900_030 Hb_014870_010 Hb_014870_010 Hb_007761_040--Hb_014870_010 Hb_001935_050 Hb_001935_050 Hb_007761_040--Hb_001935_050 Hb_000864_040 Hb_000864_040 Hb_007761_040--Hb_000864_040 Hb_000084_270 Hb_000084_270 Hb_007761_040--Hb_000084_270 Hb_002571_110--Hb_000084_270 Hb_000186_020 Hb_000186_020 Hb_002571_110--Hb_000186_020 Hb_002571_110--Hb_014870_010 Hb_007676_090 Hb_007676_090 Hb_002571_110--Hb_007676_090 Hb_003428_020 Hb_003428_020 Hb_002571_110--Hb_003428_020 Hb_000189_460 Hb_000189_460 Hb_011900_030--Hb_000189_460 Hb_031862_160 Hb_031862_160 Hb_011900_030--Hb_031862_160 Hb_002977_020 Hb_002977_020 Hb_011900_030--Hb_002977_020 Hb_001021_020 Hb_001021_020 Hb_011900_030--Hb_001021_020 Hb_001242_030 Hb_001242_030 Hb_011900_030--Hb_001242_030 Hb_014870_010--Hb_000084_270 Hb_014870_010--Hb_000186_020 Hb_014870_010--Hb_001935_050 Hb_014870_010--Hb_000864_040 Hb_000189_610 Hb_000189_610 Hb_014870_010--Hb_000189_610 Hb_014870_010--Hb_007676_090 Hb_001935_050--Hb_000864_040 Hb_001935_050--Hb_000189_610 Hb_001543_010 Hb_001543_010 Hb_001935_050--Hb_001543_010 Hb_010904_020 Hb_010904_020 Hb_001935_050--Hb_010904_020 Hb_124540_010 Hb_124540_010 Hb_001935_050--Hb_124540_010 Hb_000864_040--Hb_000189_610 Hb_000864_040--Hb_001543_010 Hb_000864_040--Hb_010904_020 Hb_000864_040--Hb_124540_010 Hb_099335_020 Hb_099335_020 Hb_000864_040--Hb_099335_020 Hb_000084_270--Hb_000186_020 Hb_000084_270--Hb_007676_090 Hb_000084_270--Hb_003428_020 Hb_000037_210 Hb_000037_210 Hb_000084_270--Hb_000037_210 Hb_009083_060 Hb_009083_060 Hb_000084_270--Hb_009083_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0687422 0.218345 7.14047 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0332371 4.63678

CAGE analysis