Hb_007763_030

Information

Type -
Description -
Location Contig7763: 32755-35357
Sequence    

Annotation

kegg
ID pop:POPTR_0013s10400g
description hypothetical protein
nr
ID XP_012077299.1
description PREDICTED: uncharacterized protein LOC105638154 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LB45
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17234 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57813: 32823-35380
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007763_030 0.0 - - PREDICTED: uncharacterized protein LOC105638154 [Jatropha curcas]
2 Hb_001246_030 0.1535277319 - - hypothetical protein JCGZ_14672 [Jatropha curcas]
3 Hb_001258_060 0.1765023658 - - PREDICTED: phosphoenolpyruvate carboxykinase [ATP] [Jatropha curcas]
4 Hb_014894_010 0.1826776982 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
5 Hb_000497_110 0.1897143653 - - PREDICTED: uncharacterized protein LOC105647268 [Jatropha curcas]
6 Hb_000742_110 0.1950012225 - - hypothetical protein JCGZ_09215 [Jatropha curcas]
7 Hb_181600_010 0.2028008335 - - PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Jatropha curcas]
8 Hb_001157_110 0.203760111 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]
9 Hb_002842_020 0.2064205534 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]
10 Hb_043485_010 0.2068384253 desease resistance Gene Name: NB-ARC PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X2 [Jatropha curcas]
11 Hb_119494_010 0.2069446884 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
12 Hb_000005_250 0.2080123244 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002411_050 0.2090068958 - - PREDICTED: cytochrome P450 4X1-like isoform X1 [Jatropha curcas]
14 Hb_000367_190 0.2111633275 - - hypothetical protein RCOM_1470550 [Ricinus communis]
15 Hb_015690_010 0.2115492821 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g038521mg [Citrus sinensis]
16 Hb_000631_070 0.2128700982 transcription factor TF Family: C2H2 PREDICTED: histone deacetylase 5 [Jatropha curcas]
17 Hb_000317_410 0.2147037821 - - PREDICTED: UDP-glycosyltransferase 73C5-like [Jatropha curcas]
18 Hb_003253_050 0.2159247209 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Jatropha curcas]
19 Hb_000616_040 0.2165787393 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
20 Hb_001486_030 0.2170919285 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007763_030 Hb_007763_030 Hb_001246_030 Hb_001246_030 Hb_007763_030--Hb_001246_030 Hb_001258_060 Hb_001258_060 Hb_007763_030--Hb_001258_060 Hb_014894_010 Hb_014894_010 Hb_007763_030--Hb_014894_010 Hb_000497_110 Hb_000497_110 Hb_007763_030--Hb_000497_110 Hb_000742_110 Hb_000742_110 Hb_007763_030--Hb_000742_110 Hb_181600_010 Hb_181600_010 Hb_007763_030--Hb_181600_010 Hb_001246_030--Hb_014894_010 Hb_001157_110 Hb_001157_110 Hb_001246_030--Hb_001157_110 Hb_001246_030--Hb_000497_110 Hb_098315_080 Hb_098315_080 Hb_001246_030--Hb_098315_080 Hb_119494_010 Hb_119494_010 Hb_001246_030--Hb_119494_010 Hb_002005_100 Hb_002005_100 Hb_001246_030--Hb_002005_100 Hb_001258_060--Hb_014894_010 Hb_004242_190 Hb_004242_190 Hb_001258_060--Hb_004242_190 Hb_008864_090 Hb_008864_090 Hb_001258_060--Hb_008864_090 Hb_001258_060--Hb_001246_030 Hb_000805_320 Hb_000805_320 Hb_001258_060--Hb_000805_320 Hb_014894_010--Hb_119494_010 Hb_014894_010--Hb_002005_100 Hb_004079_080 Hb_004079_080 Hb_014894_010--Hb_004079_080 Hb_014894_010--Hb_008864_090 Hb_011671_180 Hb_011671_180 Hb_000497_110--Hb_011671_180 Hb_000497_110--Hb_001157_110 Hb_002000_080 Hb_002000_080 Hb_000497_110--Hb_002000_080 Hb_006642_040 Hb_006642_040 Hb_000497_110--Hb_006642_040 Hb_001009_170 Hb_001009_170 Hb_000497_110--Hb_001009_170 Hb_004837_130 Hb_004837_130 Hb_000497_110--Hb_004837_130 Hb_010560_040 Hb_010560_040 Hb_000742_110--Hb_010560_040 Hb_003097_210 Hb_003097_210 Hb_000742_110--Hb_003097_210 Hb_000742_110--Hb_181600_010 Hb_155764_010 Hb_155764_010 Hb_000742_110--Hb_155764_010 Hb_000865_070 Hb_000865_070 Hb_000742_110--Hb_000865_070 Hb_048476_050 Hb_048476_050 Hb_000742_110--Hb_048476_050 Hb_181600_010--Hb_048476_050 Hb_181600_010--Hb_003097_210 Hb_001545_080 Hb_001545_080 Hb_181600_010--Hb_001545_080 Hb_001688_020 Hb_001688_020 Hb_181600_010--Hb_001688_020 Hb_181600_010--Hb_155764_010 Hb_000260_810 Hb_000260_810 Hb_181600_010--Hb_000260_810
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.51163 4.02613 1.67299 3.77671 2.68978 8.28533
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.8125 4.99796 15.4173 26.3422 5.56759

CAGE analysis