Hb_007807_010

Information

Type -
Description -
Location Contig7807: 16-1206
Sequence    

Annotation

kegg
ID pda:103700139
description uncharacterized LOC103700139
nr
ID XP_009768808.1
description PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID M5X4P9
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025968mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC104227769, partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007807_010 0.0 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
2 Hb_000264_130 0.2126108691 - - PREDICTED: uncharacterized protein LOC103870402 [Brassica rapa]
3 Hb_001425_110 0.2237935628 - - hypothetical protein Csa_6G106200 [Cucumis sativus]
4 Hb_034482_040 0.2299206184 - - aspartate kinase, partial [Francisella tularensis]
5 Hb_032202_250 0.2324770314 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
6 Hb_023051_020 0.2338102094 - - -
7 Hb_001425_070 0.2353039135 - - -
8 Hb_000300_210 0.2384360753 - - gd2b, putative [Ricinus communis]
9 Hb_003226_240 0.244496892 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
10 Hb_001433_100 0.2478701964 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
11 Hb_002989_040 0.2505628588 - - hypothetical protein 1 [Hevea brasiliensis]
12 Hb_091433_030 0.2517403738 - - -
13 Hb_113635_010 0.2552276839 - - -
14 Hb_141194_010 0.2585524181 - - PREDICTED: protein ZINC INDUCED FACILITATOR 1-like isoform X2 [Populus euphratica]
15 Hb_001842_080 0.2637933558 - - -
16 Hb_012022_100 0.2663592027 - - CPRD49 family protein [Populus trichocarpa]
17 Hb_001504_320 0.2678082199 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
18 Hb_004461_020 0.2720655541 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
19 Hb_001186_070 0.2757739355 - - PREDICTED: F-box protein FBW2-like [Gossypium raimondii]
20 Hb_000284_190 0.2773896969 - - lactoylglutathione lyase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007807_010 Hb_007807_010 Hb_000264_130 Hb_000264_130 Hb_007807_010--Hb_000264_130 Hb_001425_110 Hb_001425_110 Hb_007807_010--Hb_001425_110 Hb_034482_040 Hb_034482_040 Hb_007807_010--Hb_034482_040 Hb_032202_250 Hb_032202_250 Hb_007807_010--Hb_032202_250 Hb_023051_020 Hb_023051_020 Hb_007807_010--Hb_023051_020 Hb_001425_070 Hb_001425_070 Hb_007807_010--Hb_001425_070 Hb_000264_130--Hb_001425_110 Hb_000264_130--Hb_023051_020 Hb_135585_010 Hb_135585_010 Hb_000264_130--Hb_135585_010 Hb_000264_130--Hb_001425_070 Hb_000264_130--Hb_034482_040 Hb_091433_030 Hb_091433_030 Hb_000264_130--Hb_091433_030 Hb_001504_320 Hb_001504_320 Hb_001425_110--Hb_001504_320 Hb_000300_210 Hb_000300_210 Hb_001425_110--Hb_000300_210 Hb_000387_060 Hb_000387_060 Hb_001425_110--Hb_000387_060 Hb_000329_660 Hb_000329_660 Hb_001425_110--Hb_000329_660 Hb_001842_120 Hb_001842_120 Hb_001425_110--Hb_001842_120 Hb_002989_040 Hb_002989_040 Hb_034482_040--Hb_002989_040 Hb_003226_240 Hb_003226_240 Hb_034482_040--Hb_003226_240 Hb_001433_100 Hb_001433_100 Hb_034482_040--Hb_001433_100 Hb_034482_040--Hb_023051_020 Hb_034482_040--Hb_032202_250 Hb_141194_010 Hb_141194_010 Hb_034482_040--Hb_141194_010 Hb_032202_250--Hb_003226_240 Hb_001842_080 Hb_001842_080 Hb_032202_250--Hb_001842_080 Hb_032202_250--Hb_000300_210 Hb_032202_250--Hb_001433_100 Hb_032202_250--Hb_002989_040 Hb_023051_020--Hb_002989_040 Hb_023051_020--Hb_003226_240 Hb_113635_010 Hb_113635_010 Hb_023051_020--Hb_113635_010 Hb_023051_020--Hb_001425_070 Hb_023051_020--Hb_091433_030 Hb_001425_060 Hb_001425_060 Hb_001425_070--Hb_001425_060 Hb_001425_070--Hb_091433_030 Hb_004461_020 Hb_004461_020 Hb_001425_070--Hb_004461_020 Hb_001143_070 Hb_001143_070 Hb_001425_070--Hb_001143_070 Hb_000103_030 Hb_000103_030 Hb_001425_070--Hb_000103_030 Hb_001425_070--Hb_034482_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.395556 0.816662 0.143344 0 0.0796683

CAGE analysis