Hb_007810_040

Information

Type -
Description -
Location Contig7810: 40737-47088
Sequence    

Annotation

kegg
ID rcu:RCOM_1207110
description Dolichyl-phosphate beta-glucosyltransferase, putative (EC:2.4.1.117)
nr
ID XP_012089281.1
description PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Jatropha curcas]
swissprot
ID Q9Y673
description Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1
trembl
ID A0A067LJV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01460 PE=4 SV=1
Gene Ontology
ID GO:0005783
description dolichyl-phosphate beta-glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57961: 40457-47045 , PASA_asmbl_57962: 40486-47045 , PASA_asmbl_57963: 40791-45154
cDNA
(Sanger)
(ID:Location)		 014_K06.ab1: 40602-44900 , 034_C13.ab1: 40742-45172 , 035_I20.ab1: 40737-46244 , 051_B04.ab1: 40740-45152

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007810_040 0.0 - - PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Jatropha curcas]
2 Hb_003304_080 0.0620368603 transcription factor TF Family: bHLH lMYC3 [Hevea brasiliensis]
3 Hb_007178_010 0.0734496746 - - pseudo-hevein [Hevea brasiliensis]
4 Hb_002232_180 0.0735055749 - - PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X1 [Populus euphratica]
5 Hb_002078_040 0.0856806515 - - protein with unknown function [Ricinus communis]
6 Hb_095397_010 0.0898586457 - - hypothetical protein 25 [Hevea brasiliensis]
7 Hb_043637_010 0.0982867964 transcription factor TF Family: zf-HD hypothetical protein POPTR_0015s05220g, partial [Populus trichocarpa]
8 Hb_000050_120 0.0996783047 - - PREDICTED: uncharacterized protein LOC105630790 [Jatropha curcas]
9 Hb_004738_090 0.1048395521 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003906_120 0.1051244572 - - -
11 Hb_003507_020 0.1064035209 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
12 Hb_003906_110 0.1081314671 - - PREDICTED: molybdenum cofactor sulfurase [Jatropha curcas]
13 Hb_002067_160 0.1136220231 - - Protein MLO, putative [Ricinus communis]
14 Hb_010931_100 0.1141439509 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
15 Hb_017134_040 0.1193508775 - - hypothetical protein AALP_AA3G042000 [Arabis alpina]
16 Hb_000603_200 0.1194352235 - - PREDICTED: myosin-15 [Jatropha curcas]
17 Hb_011609_190 0.1207344047 - - 14-3-3 protein 2 [Hevea brasiliensis]
18 Hb_000376_150 0.1218301854 - - O-acyltransferase WSD1 [Gossypium arboreum]
19 Hb_019654_070 0.1221296986 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
20 Hb_012654_020 0.1237639565 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007810_040 Hb_007810_040 Hb_003304_080 Hb_003304_080 Hb_007810_040--Hb_003304_080 Hb_007178_010 Hb_007178_010 Hb_007810_040--Hb_007178_010 Hb_002232_180 Hb_002232_180 Hb_007810_040--Hb_002232_180 Hb_002078_040 Hb_002078_040 Hb_007810_040--Hb_002078_040 Hb_095397_010 Hb_095397_010 Hb_007810_040--Hb_095397_010 Hb_043637_010 Hb_043637_010 Hb_007810_040--Hb_043637_010 Hb_000050_120 Hb_000050_120 Hb_003304_080--Hb_000050_120 Hb_003304_080--Hb_002078_040 Hb_003304_080--Hb_095397_010 Hb_003304_080--Hb_043637_010 Hb_012654_020 Hb_012654_020 Hb_003304_080--Hb_012654_020 Hb_007178_010--Hb_002232_180 Hb_002067_160 Hb_002067_160 Hb_007178_010--Hb_002067_160 Hb_005488_100 Hb_005488_100 Hb_007178_010--Hb_005488_100 Hb_003906_110 Hb_003906_110 Hb_007178_010--Hb_003906_110 Hb_010931_100 Hb_010931_100 Hb_007178_010--Hb_010931_100 Hb_002232_180--Hb_002067_160 Hb_002609_260 Hb_002609_260 Hb_002232_180--Hb_002609_260 Hb_004738_090 Hb_004738_090 Hb_002232_180--Hb_004738_090 Hb_002232_180--Hb_005488_100 Hb_002078_040--Hb_000050_120 Hb_002078_040--Hb_012654_020 Hb_002172_030 Hb_002172_030 Hb_002078_040--Hb_002172_030 Hb_154381_050 Hb_154381_050 Hb_002078_040--Hb_154381_050 Hb_003906_120 Hb_003906_120 Hb_095397_010--Hb_003906_120 Hb_095397_010--Hb_002232_180 Hb_095397_010--Hb_000050_120 Hb_095397_010--Hb_043637_010 Hb_170116_010 Hb_170116_010 Hb_043637_010--Hb_170116_010 Hb_003507_020 Hb_003507_020 Hb_043637_010--Hb_003507_020 Hb_000603_200 Hb_000603_200 Hb_043637_010--Hb_000603_200 Hb_001628_110 Hb_001628_110 Hb_043637_010--Hb_001628_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2018.97 45.4779 18.2514 178.833 1963.37 1362.33
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
974.909 633.725 810.681 87.8362 21.9325

CAGE analysis