Hb_007810_060

Information

Type -
Description -
Location Contig7810: 49628-50276
Sequence    

Annotation

kegg
ID rcu:RCOM_1207080
description hypothetical protein
nr
ID XP_002530854.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9ZP41
description EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12 PE=1 SV=1
trembl
ID B9SXX5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1207080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007810_060 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002989_080 0.1612051387 - - hypothetical protein JCGZ_22462 [Jatropha curcas]
3 Hb_002301_020 0.1631694328 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
4 Hb_001425_120 0.1638407086 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
5 Hb_000914_060 0.1700877305 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor PLT1 [Populus euphratica]
6 Hb_000155_070 0.1776141679 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
7 Hb_000270_420 0.178526592 - - actin binding protein, putative [Ricinus communis]
8 Hb_003327_060 0.181090042 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
9 Hb_000907_100 0.1830540296 transcription factor TF Family: zf-HD hypothetical protein POPTR_0012s03770g, partial [Populus trichocarpa]
10 Hb_004545_150 0.1841537487 - - PREDICTED: paramyosin [Jatropha curcas]
11 Hb_000571_070 0.1857828824 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
12 Hb_072912_010 0.1860067193 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
13 Hb_002843_160 0.1860941287 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PEPR1 [Jatropha curcas]
14 Hb_000720_180 0.1871696841 - - -
15 Hb_175445_010 0.1878868351 - - Pectin methylesterase 31 isoform 2, partial [Theobroma cacao]
16 Hb_000928_230 0.1910670108 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000603_200 0.1912029604 - - PREDICTED: myosin-15 [Jatropha curcas]
18 Hb_004032_080 0.193862442 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL11 [Jatropha curcas]
19 Hb_002627_060 0.194908246 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
20 Hb_000563_540 0.1965496127 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]

Gene co-expression network

sample Hb_007810_060 Hb_007810_060 Hb_002989_080 Hb_002989_080 Hb_007810_060--Hb_002989_080 Hb_002301_020 Hb_002301_020 Hb_007810_060--Hb_002301_020 Hb_001425_120 Hb_001425_120 Hb_007810_060--Hb_001425_120 Hb_000914_060 Hb_000914_060 Hb_007810_060--Hb_000914_060 Hb_000155_070 Hb_000155_070 Hb_007810_060--Hb_000155_070 Hb_000270_420 Hb_000270_420 Hb_007810_060--Hb_000270_420 Hb_002843_160 Hb_002843_160 Hb_002989_080--Hb_002843_160 Hb_003906_110 Hb_003906_110 Hb_002989_080--Hb_003906_110 Hb_000603_200 Hb_000603_200 Hb_002989_080--Hb_000603_200 Hb_007178_010 Hb_007178_010 Hb_002989_080--Hb_007178_010 Hb_004545_150 Hb_004545_150 Hb_002989_080--Hb_004545_150 Hb_002232_180 Hb_002232_180 Hb_002989_080--Hb_002232_180 Hb_002301_020--Hb_000155_070 Hb_000442_030 Hb_000442_030 Hb_002301_020--Hb_000442_030 Hb_000563_540 Hb_000563_540 Hb_002301_020--Hb_000563_540 Hb_005488_100 Hb_005488_100 Hb_002301_020--Hb_005488_100 Hb_000571_070 Hb_000571_070 Hb_002301_020--Hb_000571_070 Hb_010931_100 Hb_010931_100 Hb_002301_020--Hb_010931_100 Hb_001425_120--Hb_002301_020 Hb_000548_040 Hb_000548_040 Hb_001425_120--Hb_000548_040 Hb_001425_120--Hb_004545_150 Hb_001425_120--Hb_000270_420 Hb_001425_120--Hb_000571_070 Hb_003327_060 Hb_003327_060 Hb_000914_060--Hb_003327_060 Hb_000914_060--Hb_000155_070 Hb_000914_060--Hb_000603_200 Hb_003627_020 Hb_003627_020 Hb_000914_060--Hb_003627_020 Hb_000061_410 Hb_000061_410 Hb_000914_060--Hb_000061_410 Hb_001892_150 Hb_001892_150 Hb_000914_060--Hb_001892_150 Hb_000155_070--Hb_003327_060 Hb_000155_070--Hb_003627_020 Hb_000907_100 Hb_000907_100 Hb_000155_070--Hb_000907_100 Hb_004126_010 Hb_004126_010 Hb_000155_070--Hb_004126_010 Hb_003060_070 Hb_003060_070 Hb_000270_420--Hb_003060_070 Hb_002067_160 Hb_002067_160 Hb_000270_420--Hb_002067_160 Hb_000270_420--Hb_000571_070 Hb_000270_420--Hb_005488_100 Hb_001476_100 Hb_001476_100 Hb_000270_420--Hb_001476_100 Hb_002477_260 Hb_002477_260 Hb_000270_420--Hb_002477_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.566473 0 0 0 0.167579 0.489544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.203177 0.159593 0.254617 0 0

CAGE analysis