Hb_007853_020

Information

Type -
Description -
Location Contig7853: 36465-37041
Sequence    

Annotation

kegg
ID rcu:RCOM_1731930
description transcription regulator, putative
nr
ID NP_001294892.1
description protein BOLA2 [Jatropha curcas]
swissprot
ID Q9FIC3
description Protein BOLA2 OS=Arabidopsis thaliana GN=BOLA2 PE=1 SV=1
trembl
ID D6BR62
description Putative transcription regulator OS=Jatropha curcas GN=JCGZ_09488 PE=2 SV=1
Gene Ontology
ID GO:0006301
description uncharacterized bola-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58098: 36726-37864
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007853_020 0.0 - - protein BOLA2 [Jatropha curcas]
2 Hb_002450_150 0.2709312561 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000429_210 0.2768287381 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
4 Hb_007213_020 0.2931989628 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
5 Hb_183612_020 0.2968543971 - - PREDICTED: small heat shock protein, chloroplastic-like [Nelumbo nucifera]
6 Hb_007951_080 0.2974831158 - - lactoylglutathione lyase, putative [Ricinus communis]
7 Hb_007223_020 0.3135991631 - - PREDICTED: probable inorganic phosphate transporter 1-3 [Jatropha curcas]
8 Hb_000139_160 0.3227282306 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000574_520 0.3255726368 - - PREDICTED: uncharacterized protein LOC105634842 isoform X1 [Jatropha curcas]
10 Hb_000175_210 0.3317123463 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
11 Hb_007594_050 0.3329048496 - - ATP binding protein, putative [Ricinus communis]
12 Hb_000009_370 0.3347137365 - - hypothetical protein JCGZ_12284 [Jatropha curcas]
13 Hb_028621_030 0.3347602712 - - PREDICTED: serine/threonine-protein kinase AGC1-7 [Jatropha curcas]
14 Hb_020273_020 0.3354682799 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_001890_040 0.3382964574 - - receptor-kinase, putative [Ricinus communis]
16 Hb_028013_030 0.3422574242 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000000_040 0.3455500505 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
18 Hb_006120_140 0.3457445915 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
19 Hb_000321_040 0.3473151965 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
20 Hb_005489_030 0.3482333959 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]

Gene co-expression network

sample Hb_007853_020 Hb_007853_020 Hb_002450_150 Hb_002450_150 Hb_007853_020--Hb_002450_150 Hb_000429_210 Hb_000429_210 Hb_007853_020--Hb_000429_210 Hb_007213_020 Hb_007213_020 Hb_007853_020--Hb_007213_020 Hb_183612_020 Hb_183612_020 Hb_007853_020--Hb_183612_020 Hb_007951_080 Hb_007951_080 Hb_007853_020--Hb_007951_080 Hb_007223_020 Hb_007223_020 Hb_007853_020--Hb_007223_020 Hb_000574_520 Hb_000574_520 Hb_002450_150--Hb_000574_520 Hb_002450_150--Hb_183612_020 Hb_007416_380 Hb_007416_380 Hb_002450_150--Hb_007416_380 Hb_000069_390 Hb_000069_390 Hb_002450_150--Hb_000069_390 Hb_141199_010 Hb_141199_010 Hb_002450_150--Hb_141199_010 Hb_000000_040 Hb_000000_040 Hb_002450_150--Hb_000000_040 Hb_000429_210--Hb_007416_380 Hb_171646_010 Hb_171646_010 Hb_000429_210--Hb_171646_010 Hb_000429_210--Hb_000069_390 Hb_000429_210--Hb_000574_520 Hb_003750_100 Hb_003750_100 Hb_000429_210--Hb_003750_100 Hb_010916_010 Hb_010916_010 Hb_000429_210--Hb_010916_010 Hb_005116_030 Hb_005116_030 Hb_007213_020--Hb_005116_030 Hb_002387_140 Hb_002387_140 Hb_007213_020--Hb_002387_140 Hb_027445_070 Hb_027445_070 Hb_007213_020--Hb_027445_070 Hb_036182_010 Hb_036182_010 Hb_007213_020--Hb_036182_010 Hb_010369_020 Hb_010369_020 Hb_007213_020--Hb_010369_020 Hb_000621_100 Hb_000621_100 Hb_007213_020--Hb_000621_100 Hb_183612_020--Hb_000574_520 Hb_183612_020--Hb_007416_380 Hb_059295_010 Hb_059295_010 Hb_183612_020--Hb_059295_010 Hb_183612_020--Hb_141199_010 Hb_001829_030 Hb_001829_030 Hb_183612_020--Hb_001829_030 Hb_000175_210 Hb_000175_210 Hb_007951_080--Hb_000175_210 Hb_001890_040 Hb_001890_040 Hb_007951_080--Hb_001890_040 Hb_028013_030 Hb_028013_030 Hb_007951_080--Hb_028013_030 Hb_020273_020 Hb_020273_020 Hb_007951_080--Hb_020273_020 Hb_000321_040 Hb_000321_040 Hb_007951_080--Hb_000321_040 Hb_002805_260 Hb_002805_260 Hb_007951_080--Hb_002805_260 Hb_007223_020--Hb_183612_020 Hb_007223_020--Hb_001829_030 Hb_008147_110 Hb_008147_110 Hb_007223_020--Hb_008147_110 Hb_105478_010 Hb_105478_010 Hb_007223_020--Hb_105478_010 Hb_001396_060 Hb_001396_060 Hb_007223_020--Hb_001396_060 Hb_000019_090 Hb_000019_090 Hb_007223_020--Hb_000019_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.852741 0.0840261 0 0.119843
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.156239 0 0 0.154536 0

CAGE analysis