Hb_007879_010

Information

Type -
Description -
Location Contig7879: 1407-2925
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP34728.1
description hypothetical protein JCGZ_11284 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KID4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11284 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007879_010 0.0 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
2 Hb_000668_120 0.2276316936 - - hypothetical protein JCGZ_11991 [Jatropha curcas]
3 Hb_011224_090 0.2329113846 - - PREDICTED: ABC transporter G family member 26 [Jatropha curcas]
4 Hb_011161_030 0.2413073753 - - PREDICTED: uncharacterized protein LOC105638906 [Jatropha curcas]
5 Hb_000172_490 0.271626188 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
6 Hb_005016_180 0.2830213319 - - phosphoglycerate kinase, putative [Ricinus communis]
7 Hb_001138_030 0.2910421199 - - STRESS ENHANCED protein 1 [Populus trichocarpa]
8 Hb_001501_040 0.2930443358 - - PREDICTED: uncharacterized protein LOC102663792 [Glycine max]
9 Hb_129459_010 0.2992450304 - - PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like [Populus euphratica]
10 Hb_008221_130 0.2997816374 - - hypothetical protein VITISV_016971 [Vitis vinifera]
11 Hb_000896_130 0.3001340004 transcription factor TF Family: CPP cysteine-rich polycomb-like family protein [Populus trichocarpa]
12 Hb_001031_060 0.3002354988 - - PREDICTED: uncharacterized protein LOC103940329 [Pyrus x bretschneideri]
13 Hb_001318_160 0.3020921298 - - Polygalacturonase precursor, putative [Ricinus communis]
14 Hb_001506_030 0.3090949811 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
15 Hb_034310_010 0.3111487019 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
16 Hb_000521_180 0.3115447054 - - PREDICTED: uncharacterized protein LOC105650335 [Jatropha curcas]
17 Hb_000104_070 0.3263032895 - - PREDICTED: citrate-binding protein-like [Jatropha curcas]
18 Hb_003762_010 0.3264979903 - - -
19 Hb_004994_130 0.3270051191 transcription factor TF Family: MYB PREDICTED: myb-like protein M [Jatropha curcas]
20 Hb_027472_130 0.3315215544 - - Cytochrome P450 [Theobroma cacao]

Gene co-expression network

sample Hb_007879_010 Hb_007879_010 Hb_000668_120 Hb_000668_120 Hb_007879_010--Hb_000668_120 Hb_011224_090 Hb_011224_090 Hb_007879_010--Hb_011224_090 Hb_011161_030 Hb_011161_030 Hb_007879_010--Hb_011161_030 Hb_000172_490 Hb_000172_490 Hb_007879_010--Hb_000172_490 Hb_005016_180 Hb_005016_180 Hb_007879_010--Hb_005016_180 Hb_001138_030 Hb_001138_030 Hb_007879_010--Hb_001138_030 Hb_000668_120--Hb_011224_090 Hb_003780_040 Hb_003780_040 Hb_000668_120--Hb_003780_040 Hb_183612_020 Hb_183612_020 Hb_000668_120--Hb_183612_020 Hb_009164_020 Hb_009164_020 Hb_000668_120--Hb_009164_020 Hb_059295_010 Hb_059295_010 Hb_000668_120--Hb_059295_010 Hb_001318_160 Hb_001318_160 Hb_011224_090--Hb_001318_160 Hb_000261_340 Hb_000261_340 Hb_011224_090--Hb_000261_340 Hb_002450_150 Hb_002450_150 Hb_011224_090--Hb_002450_150 Hb_000960_120 Hb_000960_120 Hb_011224_090--Hb_000960_120 Hb_129459_010 Hb_129459_010 Hb_011161_030--Hb_129459_010 Hb_034310_010 Hb_034310_010 Hb_011161_030--Hb_034310_010 Hb_004495_010 Hb_004495_010 Hb_011161_030--Hb_004495_010 Hb_074184_010 Hb_074184_010 Hb_011161_030--Hb_074184_010 Hb_002374_330 Hb_002374_330 Hb_011161_030--Hb_002374_330 Hb_011161_030--Hb_000172_490 Hb_014497_030 Hb_014497_030 Hb_000172_490--Hb_014497_030 Hb_000540_220 Hb_000540_220 Hb_000172_490--Hb_000540_220 Hb_124951_010 Hb_124951_010 Hb_000172_490--Hb_124951_010 Hb_000221_230 Hb_000221_230 Hb_000172_490--Hb_000221_230 Hb_000521_180 Hb_000521_180 Hb_000172_490--Hb_000521_180 Hb_001269_510 Hb_001269_510 Hb_000172_490--Hb_001269_510 Hb_000104_070 Hb_000104_070 Hb_005016_180--Hb_000104_070 Hb_002217_410 Hb_002217_410 Hb_005016_180--Hb_002217_410 Hb_000896_130 Hb_000896_130 Hb_005016_180--Hb_000896_130 Hb_004994_360 Hb_004994_360 Hb_005016_180--Hb_004994_360 Hb_003762_010 Hb_003762_010 Hb_005016_180--Hb_003762_010 Hb_005016_180--Hb_011161_030 Hb_001138_030--Hb_129459_010 Hb_045481_010 Hb_045481_010 Hb_001138_030--Hb_045481_010 Hb_000189_430 Hb_000189_430 Hb_001138_030--Hb_000189_430 Hb_001138_030--Hb_011161_030 Hb_002475_120 Hb_002475_120 Hb_001138_030--Hb_002475_120 Hb_003494_010 Hb_003494_010 Hb_001138_030--Hb_003494_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0151162 0.0717487 0.0138789 0.0182412 0.0191807
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis