Hb_007894_100

Information

Type -
Description -
Location Contig7894: 86821-92090
Sequence    

Annotation

kegg
ID rcu:RCOM_0584630
description hypothetical protein
nr
ID XP_012070817.1
description PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4W2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00881 PE=4 SV=1
Gene Ontology
ID GO:0009791
description rho gtpase-activating 32

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58261: 89546-90663
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007894_100 0.0 - - PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
2 Hb_000256_170 0.1569768111 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
3 Hb_000574_180 0.1580249174 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
4 Hb_000397_140 0.1580910583 transcription factor TF Family: PLATZ hypothetical protein JCGZ_16980 [Jatropha curcas]
5 Hb_000193_060 0.1639642023 - - PREDICTED: F-box protein At4g35930 [Jatropha curcas]
6 Hb_006060_010 0.1664795695 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
7 Hb_000261_340 0.1685408832 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
8 Hb_000397_170 0.1688120354 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000739_250 0.1698310583 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
10 Hb_003226_060 0.1714938885 - - Pectinesterase-2 precursor, putative [Ricinus communis]
11 Hb_183719_010 0.1720751721 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
12 Hb_000413_220 0.173594157 - - PREDICTED: kinesin-1 [Jatropha curcas]
13 Hb_003119_040 0.1843381358 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
14 Hb_000331_020 0.1853062588 - - cytochrome P450, putative [Ricinus communis]
15 Hb_005599_010 0.1860816448 - - Protein MLO, putative [Ricinus communis]
16 Hb_000395_120 0.1865230366 - - Stellacyanin, putative [Ricinus communis]
17 Hb_004586_050 0.1917180849 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
18 Hb_001754_100 0.1935015082 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
19 Hb_002540_100 0.1948574237 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
20 Hb_150745_010 0.196102341 - - hypothetical protein JCGZ_17337 [Jatropha curcas]

Gene co-expression network

sample Hb_007894_100 Hb_007894_100 Hb_000256_170 Hb_000256_170 Hb_007894_100--Hb_000256_170 Hb_000574_180 Hb_000574_180 Hb_007894_100--Hb_000574_180 Hb_000397_140 Hb_000397_140 Hb_007894_100--Hb_000397_140 Hb_000193_060 Hb_000193_060 Hb_007894_100--Hb_000193_060 Hb_006060_010 Hb_006060_010 Hb_007894_100--Hb_006060_010 Hb_000261_340 Hb_000261_340 Hb_007894_100--Hb_000261_340 Hb_000256_170--Hb_000574_180 Hb_000413_220 Hb_000413_220 Hb_000256_170--Hb_000413_220 Hb_000739_250 Hb_000739_250 Hb_000256_170--Hb_000739_250 Hb_000331_020 Hb_000331_020 Hb_000256_170--Hb_000331_020 Hb_000397_170 Hb_000397_170 Hb_000256_170--Hb_000397_170 Hb_000668_190 Hb_000668_190 Hb_000256_170--Hb_000668_190 Hb_000574_180--Hb_000413_220 Hb_000574_180--Hb_000739_250 Hb_000574_180--Hb_000668_190 Hb_000574_180--Hb_000397_170 Hb_001754_100 Hb_001754_100 Hb_000574_180--Hb_001754_100 Hb_000397_140--Hb_001754_100 Hb_000397_140--Hb_000397_170 Hb_150745_010 Hb_150745_010 Hb_000397_140--Hb_150745_010 Hb_003226_060 Hb_003226_060 Hb_000397_140--Hb_003226_060 Hb_002874_120 Hb_002874_120 Hb_000397_140--Hb_002874_120 Hb_003119_040 Hb_003119_040 Hb_000193_060--Hb_003119_040 Hb_000395_120 Hb_000395_120 Hb_000193_060--Hb_000395_120 Hb_000878_120 Hb_000878_120 Hb_000193_060--Hb_000878_120 Hb_000193_060--Hb_006060_010 Hb_015037_010 Hb_015037_010 Hb_000193_060--Hb_015037_010 Hb_001377_370 Hb_001377_370 Hb_000193_060--Hb_001377_370 Hb_012753_150 Hb_012753_150 Hb_006060_010--Hb_012753_150 Hb_000260_610 Hb_000260_610 Hb_006060_010--Hb_000260_610 Hb_003878_060 Hb_003878_060 Hb_006060_010--Hb_003878_060 Hb_000960_120 Hb_000960_120 Hb_006060_010--Hb_000960_120 Hb_006060_010--Hb_003119_040 Hb_013344_010 Hb_013344_010 Hb_006060_010--Hb_013344_010 Hb_000261_340--Hb_000397_170 Hb_000261_340--Hb_003226_060 Hb_000261_340--Hb_000574_180 Hb_000261_340--Hb_000256_170 Hb_005599_010 Hb_005599_010 Hb_000261_340--Hb_005599_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0197491 0.0888216 0.501454 0.190013 0 0.0173741
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0285113 0

CAGE analysis