Hb_007894_160

Information

Type -
Description -
Location Contig7894: 131094-134765
Sequence    

Annotation

kegg
ID pop:POPTR_0001s44970g
description calcineurin-like phosphoesterase family protein
nr
ID XP_012070798.1
description PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
swissprot
ID Q9LJU7
description Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1
trembl
ID A0A067L4U3
description Purple acid phosphatase OS=Jatropha curcas GN=JCGZ_00866 PE=3 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58277: 131152-134762
cDNA
(Sanger)
(ID:Location)		 033_C07.ab1: 131152-132589 , 037_G22.ab1: 134245-134762

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007894_160 0.0 - - PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
2 Hb_000610_040 0.0687656555 - - PREDICTED: uncharacterized protein LOC105635307 isoform X1 [Jatropha curcas]
3 Hb_008397_010 0.0693215907 - - PREDICTED: uncharacterized protein LOC105640192 isoform X2 [Jatropha curcas]
4 Hb_002686_040 0.071274874 - - PREDICTED: T-complex protein 1 subunit theta [Jatropha curcas]
5 Hb_000243_130 0.0724425772 - - hypothetical protein M569_10795, partial [Genlisea aurea]
6 Hb_103747_020 0.0773006139 - - calcium dependent protein kinase, partial [Hevea brasiliensis]
7 Hb_002475_040 0.077308978 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
8 Hb_002641_130 0.0785455285 - - PREDICTED: uncharacterized protein LOC105643556 [Jatropha curcas]
9 Hb_003436_020 0.0792246811 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105636276 isoform X2 [Jatropha curcas]
10 Hb_178968_050 0.082256714 - - PREDICTED: probable serine incorporator [Jatropha curcas]
11 Hb_000494_050 0.0834572488 - - cationic amino acid transporter, putative [Ricinus communis]
12 Hb_000284_230 0.0843134467 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
13 Hb_158092_080 0.0849156518 - - hypothetical protein JCGZ_23092 [Jatropha curcas]
14 Hb_004064_050 0.085729465 - - Structural maintenance of chromosome, putative [Ricinus communis]
15 Hb_060980_010 0.0858945768 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
16 Hb_009486_080 0.0882424037 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]
17 Hb_002014_040 0.0884467158 - - site-1 protease, putative [Ricinus communis]
18 Hb_027506_010 0.0887657646 - - PREDICTED: cullin-4 [Jatropha curcas]
19 Hb_019840_030 0.0897393525 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
20 Hb_012055_110 0.0899970503 - - tetratricopeptide repeat protein, tpr, putative [Ricinus communis]

Gene co-expression network

sample Hb_007894_160 Hb_007894_160 Hb_000610_040 Hb_000610_040 Hb_007894_160--Hb_000610_040 Hb_008397_010 Hb_008397_010 Hb_007894_160--Hb_008397_010 Hb_002686_040 Hb_002686_040 Hb_007894_160--Hb_002686_040 Hb_000243_130 Hb_000243_130 Hb_007894_160--Hb_000243_130 Hb_103747_020 Hb_103747_020 Hb_007894_160--Hb_103747_020 Hb_002475_040 Hb_002475_040 Hb_007894_160--Hb_002475_040 Hb_000321_140 Hb_000321_140 Hb_000610_040--Hb_000321_140 Hb_003436_020 Hb_003436_020 Hb_000610_040--Hb_003436_020 Hb_000610_040--Hb_103747_020 Hb_003186_020 Hb_003186_020 Hb_000610_040--Hb_003186_020 Hb_000702_090 Hb_000702_090 Hb_000610_040--Hb_000702_090 Hb_000640_070 Hb_000640_070 Hb_008397_010--Hb_000640_070 Hb_001194_020 Hb_001194_020 Hb_008397_010--Hb_001194_020 Hb_000336_020 Hb_000336_020 Hb_008397_010--Hb_000336_020 Hb_000284_230 Hb_000284_230 Hb_008397_010--Hb_000284_230 Hb_073973_150 Hb_073973_150 Hb_008397_010--Hb_073973_150 Hb_002686_040--Hb_103747_020 Hb_006618_090 Hb_006618_090 Hb_002686_040--Hb_006618_090 Hb_005723_020 Hb_005723_020 Hb_002686_040--Hb_005723_020 Hb_000174_060 Hb_000174_060 Hb_002686_040--Hb_000174_060 Hb_000398_080 Hb_000398_080 Hb_002686_040--Hb_000398_080 Hb_044486_040 Hb_044486_040 Hb_000243_130--Hb_044486_040 Hb_004064_050 Hb_004064_050 Hb_000243_130--Hb_004064_050 Hb_033554_020 Hb_033554_020 Hb_000243_130--Hb_033554_020 Hb_000243_130--Hb_002475_040 Hb_009486_080 Hb_009486_080 Hb_000243_130--Hb_009486_080 Hb_000317_510 Hb_000317_510 Hb_103747_020--Hb_000317_510 Hb_002014_040 Hb_002014_040 Hb_103747_020--Hb_002014_040 Hb_103747_020--Hb_005723_020 Hb_008226_090 Hb_008226_090 Hb_103747_020--Hb_008226_090 Hb_002475_040--Hb_000284_230 Hb_002475_040--Hb_004064_050 Hb_158092_080 Hb_158092_080 Hb_002475_040--Hb_158092_080 Hb_003124_160 Hb_003124_160 Hb_002475_040--Hb_003124_160 Hb_012055_110 Hb_012055_110 Hb_002475_040--Hb_012055_110 Hb_001935_160 Hb_001935_160 Hb_002475_040--Hb_001935_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.4252 24.5262 27.113 25.3503 27.5309 19.0012
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.33644 8.08109 13.8238 28.7781 24.1202

CAGE analysis