Hb_007894_260

Information

Type -
Description -
Location Contig7894: 170229-173795
Sequence    

Annotation

kegg
ID rcu:RCOM_0586540
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002522985.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID B9SAG6
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_0586540 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58289: 171519-171874
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007894_260 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_006569_110 0.0736011278 - - conserved hypothetical protein [Ricinus communis]
3 Hb_006938_010 0.0779415156 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
4 Hb_003060_080 0.0936396139 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
5 Hb_000010_200 0.1021188456 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_000381_030 0.1021657486 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
7 Hb_000920_360 0.1115877151 - - PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
8 Hb_001331_040 0.1126532683 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
9 Hb_003900_050 0.1141333828 transcription factor TF Family: HSF Heat Stress Transcription Factor family protein [Populus trichocarpa]
10 Hb_000286_190 0.1156609472 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
11 Hb_004884_200 0.1179539647 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
12 Hb_025526_010 0.1185132026 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
13 Hb_006788_150 0.1201437898 - - conserved hypothetical protein [Ricinus communis]
14 Hb_009627_040 0.1221029158 - - Lipase class 3-related protein, putative [Theobroma cacao]
15 Hb_008692_010 0.1238215345 - - putative polyol transported protein 2 [Hevea brasiliensis]
16 Hb_005116_010 0.1279992693 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
17 Hb_004881_060 0.1285104637 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
18 Hb_110218_010 0.1293240073 - - PREDICTED: uncharacterized protein LOC104428128 [Eucalyptus grandis]
19 Hb_029508_030 0.1305862586 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
20 Hb_014037_010 0.1308919298 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]

Gene co-expression network

sample Hb_007894_260 Hb_007894_260 Hb_006569_110 Hb_006569_110 Hb_007894_260--Hb_006569_110 Hb_006938_010 Hb_006938_010 Hb_007894_260--Hb_006938_010 Hb_003060_080 Hb_003060_080 Hb_007894_260--Hb_003060_080 Hb_000010_200 Hb_000010_200 Hb_007894_260--Hb_000010_200 Hb_000381_030 Hb_000381_030 Hb_007894_260--Hb_000381_030 Hb_000920_360 Hb_000920_360 Hb_007894_260--Hb_000920_360 Hb_006569_110--Hb_006938_010 Hb_006569_110--Hb_003060_080 Hb_000254_150 Hb_000254_150 Hb_006569_110--Hb_000254_150 Hb_002928_220 Hb_002928_220 Hb_006569_110--Hb_002928_220 Hb_006970_100 Hb_006970_100 Hb_006569_110--Hb_006970_100 Hb_001331_040 Hb_001331_040 Hb_006938_010--Hb_001331_040 Hb_006938_010--Hb_000381_030 Hb_006949_030 Hb_006949_030 Hb_006938_010--Hb_006949_030 Hb_002542_090 Hb_002542_090 Hb_006938_010--Hb_002542_090 Hb_003060_080--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_003060_080--Hb_006651_010 Hb_025526_010 Hb_025526_010 Hb_003060_080--Hb_025526_010 Hb_003060_080--Hb_006938_010 Hb_002686_390 Hb_002686_390 Hb_000010_200--Hb_002686_390 Hb_000010_200--Hb_000381_030 Hb_000010_200--Hb_001331_040 Hb_004884_200 Hb_004884_200 Hb_000010_200--Hb_004884_200 Hb_000010_200--Hb_006949_030 Hb_000381_030--Hb_001331_040 Hb_000381_030--Hb_006949_030 Hb_001013_040 Hb_001013_040 Hb_000381_030--Hb_001013_040 Hb_000286_190 Hb_000286_190 Hb_000920_360--Hb_000286_190 Hb_005797_030 Hb_005797_030 Hb_000920_360--Hb_005797_030 Hb_029508_030 Hb_029508_030 Hb_000920_360--Hb_029508_030 Hb_000608_450 Hb_000608_450 Hb_000920_360--Hb_000608_450 Hb_088916_010 Hb_088916_010 Hb_000920_360--Hb_088916_010 Hb_001864_010 Hb_001864_010 Hb_000920_360--Hb_001864_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00708556 5.91659 1.22924 1.58231 0.00536174 0.0152819
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0129875 0.0102205 0.0587497 17.117 3.21133

CAGE analysis