Hb_007904_190

Information

Type -
Description -
Location Contig7904: 103192-103783
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007904_190 0.0 - - -
2 Hb_000014_130 0.2359122693 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
3 Hb_002837_090 0.2442276011 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
4 Hb_004534_020 0.2620691586 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
5 Hb_165078_010 0.2640857931 - - -
6 Hb_003609_010 0.2645359521 - - -
7 Hb_024828_040 0.2662300905 - - -
8 Hb_003859_010 0.2768710631 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
9 Hb_057746_010 0.2803973709 - - -
10 Hb_004317_050 0.2810335647 - - -
11 Hb_000317_090 0.2878080005 - - hypothetical protein RCOM_1176360 [Ricinus communis]
12 Hb_101040_010 0.2905503842 - - -
13 Hb_000298_080 0.290712654 - - -
14 Hb_002307_070 0.2921437362 - - hypothetical protein JCGZ_14841 [Jatropha curcas]
15 Hb_002904_090 0.2923342361 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like [Vitis vinifera]
16 Hb_050286_020 0.2979621666 - - -
17 Hb_002805_140 0.3030287461 - - hypothetical protein POPTR_0001s28390g [Populus trichocarpa]
18 Hb_000295_090 0.3031407718 - - Clathrin light chain 2 [Glycine soja]
19 Hb_126838_020 0.3049641751 - - JHL22C18.7 [Jatropha curcas]
20 Hb_114261_010 0.3076854617 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]

Gene co-expression network

sample Hb_007904_190 Hb_007904_190 Hb_000014_130 Hb_000014_130 Hb_007904_190--Hb_000014_130 Hb_002837_090 Hb_002837_090 Hb_007904_190--Hb_002837_090 Hb_004534_020 Hb_004534_020 Hb_007904_190--Hb_004534_020 Hb_165078_010 Hb_165078_010 Hb_007904_190--Hb_165078_010 Hb_003609_010 Hb_003609_010 Hb_007904_190--Hb_003609_010 Hb_024828_040 Hb_024828_040 Hb_007904_190--Hb_024828_040 Hb_041237_010 Hb_041237_010 Hb_000014_130--Hb_041237_010 Hb_007978_020 Hb_007978_020 Hb_000014_130--Hb_007978_020 Hb_003772_020 Hb_003772_020 Hb_000014_130--Hb_003772_020 Hb_002904_090 Hb_002904_090 Hb_000014_130--Hb_002904_090 Hb_032018_010 Hb_032018_010 Hb_000014_130--Hb_032018_010 Hb_003398_010 Hb_003398_010 Hb_000014_130--Hb_003398_010 Hb_000317_090 Hb_000317_090 Hb_002837_090--Hb_000317_090 Hb_002837_090--Hb_032018_010 Hb_002837_090--Hb_000014_130 Hb_001276_010 Hb_001276_010 Hb_002837_090--Hb_001276_010 Hb_000062_500 Hb_000062_500 Hb_002837_090--Hb_000062_500 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_137543_010 Hb_137543_010 Hb_004534_020--Hb_137543_010 Hb_007382_040 Hb_007382_040 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_002609_100 Hb_002609_100 Hb_004534_020--Hb_002609_100 Hb_166786_030 Hb_166786_030 Hb_004534_020--Hb_166786_030 Hb_057746_010 Hb_057746_010 Hb_165078_010--Hb_057746_010 Hb_105484_010 Hb_105484_010 Hb_165078_010--Hb_105484_010 Hb_050286_020 Hb_050286_020 Hb_165078_010--Hb_050286_020 Hb_000831_040 Hb_000831_040 Hb_165078_010--Hb_000831_040 Hb_098842_010 Hb_098842_010 Hb_165078_010--Hb_098842_010 Hb_004317_050 Hb_004317_050 Hb_165078_010--Hb_004317_050 Hb_000563_220 Hb_000563_220 Hb_003609_010--Hb_000563_220 Hb_083569_010 Hb_083569_010 Hb_003609_010--Hb_083569_010 Hb_094101_010 Hb_094101_010 Hb_003609_010--Hb_094101_010 Hb_003609_010--Hb_002904_090 Hb_003609_010--Hb_000317_090 Hb_024828_040--Hb_166786_030 Hb_024828_040--Hb_003859_010 Hb_075812_010 Hb_075812_010 Hb_024828_040--Hb_075812_010 Hb_024828_040--Hb_001565_100 Hb_024828_040--Hb_004534_020 Hb_000816_110 Hb_000816_110 Hb_024828_040--Hb_000816_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.99182 1.28889 0.164006 0 0.742265 6.11655
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.06226 0 0 0

CAGE analysis