Hb_007919_080

Information

Type -
Description -
Location Contig7919: 57931-62874
Sequence    

Annotation

kegg
ID rcu:RCOM_1602580
description hypothetical protein
nr
ID XP_012073525.1
description PREDICTED: uncharacterized protein At1g76660 isoform X1 [Jatropha curcas]
swissprot
ID Q9SRE5
description Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=2 SV=1
trembl
ID A0A067KKH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08002 PE=4 SV=1
Gene Ontology
ID GO:0005886
description PREDICTED: uncharacterized protein At1g76660 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58377: 58568-62842
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007919_080 0.0 - - PREDICTED: uncharacterized protein At1g76660 isoform X1 [Jatropha curcas]
2 Hb_000416_050 0.1160219801 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
3 Hb_000556_150 0.1196893301 - - PREDICTED: fasciclin-like arabinogalactan protein 10 [Populus euphratica]
4 Hb_001486_170 0.1218573742 - - PREDICTED: syntaxin-132 [Jatropha curcas]
5 Hb_002836_140 0.1240047798 - - PREDICTED: uncharacterized protein C1450.15 [Jatropha curcas]
6 Hb_000022_200 0.1254385849 - - PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
7 Hb_002900_080 0.1256565163 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
8 Hb_007951_040 0.1306753989 - - signal peptidase family protein [Populus trichocarpa]
9 Hb_000445_050 0.1359401529 - - PREDICTED: DNA topoisomerase 2-binding protein 1 [Jatropha curcas]
10 Hb_002485_030 0.1362230387 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase 1-like [Jatropha curcas]
11 Hb_003858_040 0.1369182771 - - hypothetical protein POPTR_0007s14590g [Populus trichocarpa]
12 Hb_002942_060 0.1369440919 - - RNA-binding protein, putative [Ricinus communis]
13 Hb_002217_380 0.1397726984 - - PREDICTED: uncharacterized protein LOC105643567 [Jatropha curcas]
14 Hb_000189_510 0.1409805888 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
15 Hb_001050_010 0.1420876628 - - Advillin [Gossypium arboreum]
16 Hb_008511_060 0.1435639785 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
17 Hb_002542_020 0.1456008783 - - PREDICTED: uncharacterized protein LOC105634003 isoform X1 [Jatropha curcas]
18 Hb_006831_070 0.1466662835 - - PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Jatropha curcas]
19 Hb_005463_130 0.1466940232 - - PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase [Jatropha curcas]
20 Hb_008556_030 0.1474684556 - - PREDICTED: uncharacterized protein LOC105648021 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007919_080 Hb_007919_080 Hb_000416_050 Hb_000416_050 Hb_007919_080--Hb_000416_050 Hb_000556_150 Hb_000556_150 Hb_007919_080--Hb_000556_150 Hb_001486_170 Hb_001486_170 Hb_007919_080--Hb_001486_170 Hb_002836_140 Hb_002836_140 Hb_007919_080--Hb_002836_140 Hb_000022_200 Hb_000022_200 Hb_007919_080--Hb_000022_200 Hb_002900_080 Hb_002900_080 Hb_007919_080--Hb_002900_080 Hb_000189_330 Hb_000189_330 Hb_000416_050--Hb_000189_330 Hb_000270_460 Hb_000270_460 Hb_000416_050--Hb_000270_460 Hb_001418_040 Hb_001418_040 Hb_000416_050--Hb_001418_040 Hb_001143_180 Hb_001143_180 Hb_000416_050--Hb_001143_180 Hb_000868_060 Hb_000868_060 Hb_000416_050--Hb_000868_060 Hb_001807_010 Hb_001807_010 Hb_000416_050--Hb_001807_010 Hb_000392_370 Hb_000392_370 Hb_000556_150--Hb_000392_370 Hb_005463_130 Hb_005463_130 Hb_000556_150--Hb_005463_130 Hb_086022_010 Hb_086022_010 Hb_000556_150--Hb_086022_010 Hb_001501_080 Hb_001501_080 Hb_000556_150--Hb_001501_080 Hb_007904_210 Hb_007904_210 Hb_000556_150--Hb_007904_210 Hb_001486_170--Hb_005463_130 Hb_001486_170--Hb_002836_140 Hb_013726_080 Hb_013726_080 Hb_001486_170--Hb_013726_080 Hb_002054_050 Hb_002054_050 Hb_001486_170--Hb_002054_050 Hb_000915_080 Hb_000915_080 Hb_001486_170--Hb_000915_080 Hb_008556_030 Hb_008556_030 Hb_001486_170--Hb_008556_030 Hb_007951_040 Hb_007951_040 Hb_002836_140--Hb_007951_040 Hb_002836_140--Hb_000915_080 Hb_002836_140--Hb_008556_030 Hb_000414_050 Hb_000414_050 Hb_002836_140--Hb_000414_050 Hb_002783_170 Hb_002783_170 Hb_002836_140--Hb_002783_170 Hb_000261_330 Hb_000261_330 Hb_000022_200--Hb_000261_330 Hb_045770_010 Hb_045770_010 Hb_000022_200--Hb_045770_010 Hb_000022_200--Hb_002900_080 Hb_002485_030 Hb_002485_030 Hb_000022_200--Hb_002485_030 Hb_001085_260 Hb_001085_260 Hb_000022_200--Hb_001085_260 Hb_000022_200--Hb_007904_210 Hb_001205_250 Hb_001205_250 Hb_002900_080--Hb_001205_250 Hb_000007_390 Hb_000007_390 Hb_002900_080--Hb_000007_390 Hb_001227_130 Hb_001227_130 Hb_002900_080--Hb_001227_130 Hb_000445_050 Hb_000445_050 Hb_002900_080--Hb_000445_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.4015 5.88619 27.6366 23.2402 18.4532 19.5199
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.5655 5.14321 11.3826 9.34463 5.37511

CAGE analysis