Hb_007928_030

Information

Type -
Description -
Location Contig7928: 61018-63602
Sequence    

Annotation

kegg
ID rcu:RCOM_1635810
description Dual specificity phosphatase Cdc25, putative (EC:3.1.3.48)
nr
ID XP_012088582.1
description PREDICTED: dual specificity phosphatase Cdc25 [Jatropha curcas]
swissprot
ID Q8GY31
description Dual specificity phosphatase Cdc25 OS=Arabidopsis thaliana GN=CDC25 PE=1 SV=1
trembl
ID A0A067JM57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26635 PE=4 SV=1
Gene Ontology
ID GO:0005739
description dual specificity phosphatase cdc25

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58427: 61044-63496 , PASA_asmbl_58429: 62306-62672 , PASA_asmbl_58430: 62005-62250 , PASA_asmbl_58431: 61414-63248
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007928_030 0.0 - - PREDICTED: dual specificity phosphatase Cdc25 [Jatropha curcas]
2 Hb_007894_060 0.0557608368 - - PREDICTED: ubiquitin thioesterase OTU1 [Jatropha curcas]
3 Hb_011344_120 0.0632534732 - - PREDICTED: uncharacterized protein LOC105645969 [Jatropha curcas]
4 Hb_001386_040 0.0673865345 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]
5 Hb_000538_120 0.0680382101 transcription factor TF Family: SET PREDICTED: protein SET DOMAIN GROUP 40 [Jatropha curcas]
6 Hb_000431_170 0.0726275331 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]
7 Hb_005914_170 0.0738748508 - - PREDICTED: eukaryotic translation initiation factor isoform 4E-2-like [Gossypium raimondii]
8 Hb_028396_010 0.0745516952 - - PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]
9 Hb_001189_070 0.075211105 - - PREDICTED: ribosome production factor 1 [Jatropha curcas]
10 Hb_000948_160 0.0758053474 - - PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Jatropha curcas]
11 Hb_004767_080 0.077432519 - - PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X1 [Jatropha curcas]
12 Hb_186982_040 0.0775454752 - - hypothetical protein PHAVU_003G089200g [Phaseolus vulgaris]
13 Hb_000136_260 0.079138155 - - 40S ribosomal protein S5A [Hevea brasiliensis]
14 Hb_000210_120 0.0804569146 - - PREDICTED: uncharacterized protein LOC105635829 isoform X1 [Jatropha curcas]
15 Hb_031862_100 0.0814322098 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_000465_390 0.0815928049 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Jatropha curcas]
17 Hb_005307_050 0.082183534 - - PREDICTED: uncharacterized protein LOC105645274 [Jatropha curcas]
18 Hb_001301_110 0.0829773201 - - PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha curcas]
19 Hb_005391_040 0.0829806476 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]
20 Hb_000431_070 0.0832068016 - - Mitochondrial import receptor subunit TOM20, putative [Ricinus communis]

Gene co-expression network

sample Hb_007928_030 Hb_007928_030 Hb_007894_060 Hb_007894_060 Hb_007928_030--Hb_007894_060 Hb_011344_120 Hb_011344_120 Hb_007928_030--Hb_011344_120 Hb_001386_040 Hb_001386_040 Hb_007928_030--Hb_001386_040 Hb_000538_120 Hb_000538_120 Hb_007928_030--Hb_000538_120 Hb_000431_170 Hb_000431_170 Hb_007928_030--Hb_000431_170 Hb_005914_170 Hb_005914_170 Hb_007928_030--Hb_005914_170 Hb_007894_060--Hb_000538_120 Hb_001301_110 Hb_001301_110 Hb_007894_060--Hb_001301_110 Hb_002301_150 Hb_002301_150 Hb_007894_060--Hb_002301_150 Hb_000136_260 Hb_000136_260 Hb_007894_060--Hb_000136_260 Hb_000069_720 Hb_000069_720 Hb_007894_060--Hb_000069_720 Hb_011344_120--Hb_005914_170 Hb_001189_070 Hb_001189_070 Hb_011344_120--Hb_001189_070 Hb_009787_030 Hb_009787_030 Hb_011344_120--Hb_009787_030 Hb_004108_220 Hb_004108_220 Hb_011344_120--Hb_004108_220 Hb_000347_240 Hb_000347_240 Hb_011344_120--Hb_000347_240 Hb_031862_100 Hb_031862_100 Hb_001386_040--Hb_031862_100 Hb_000948_160 Hb_000948_160 Hb_001386_040--Hb_000948_160 Hb_002183_060 Hb_002183_060 Hb_001386_040--Hb_002183_060 Hb_000465_390 Hb_000465_390 Hb_001386_040--Hb_000465_390 Hb_000053_020 Hb_000053_020 Hb_001386_040--Hb_000053_020 Hb_000538_120--Hb_000136_260 Hb_000302_140 Hb_000302_140 Hb_000538_120--Hb_000302_140 Hb_000571_020 Hb_000571_020 Hb_000538_120--Hb_000571_020 Hb_000413_280 Hb_000413_280 Hb_000538_120--Hb_000413_280 Hb_000431_170--Hb_000948_160 Hb_006693_020 Hb_006693_020 Hb_000431_170--Hb_006693_020 Hb_000081_160 Hb_000081_160 Hb_000431_170--Hb_000081_160 Hb_000460_030 Hb_000460_030 Hb_000431_170--Hb_000460_030 Hb_000390_300 Hb_000390_300 Hb_000431_170--Hb_000390_300 Hb_010098_050 Hb_010098_050 Hb_000431_170--Hb_010098_050 Hb_000210_120 Hb_000210_120 Hb_005914_170--Hb_000210_120 Hb_001314_050 Hb_001314_050 Hb_005914_170--Hb_001314_050 Hb_005914_170--Hb_031862_100 Hb_003633_050 Hb_003633_050 Hb_005914_170--Hb_003633_050 Hb_023001_040 Hb_023001_040 Hb_005914_170--Hb_023001_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.3331 22.8227 32.4526 51.2004 24.5204 31.2357
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.6236 83.5162 37.5378 50.7384 36.6767

CAGE analysis