Hb_007951_130

Information

Type desease resistance
Description Gene Name: UBN2_3
Location Contig7951: 113129-122320
Sequence    

Annotation

kegg
ID mdm:103437077
description uncharacterized LOC103437077
nr
ID BAJ53244.1
description JHL25H03.6 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUD4
description JHL25H03.6 protein (Fragment) OS=Jatropha curcas GN=JHL25H03.6 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58520: 117501-117633 , PASA_asmbl_58521: 118106-118714
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007951_130 0.0 desease resistance Gene Name: UBN2_3 JHL25H03.6 [Jatropha curcas]
2 Hb_139138_010 0.14647198 - - PREDICTED: uncharacterized protein LOC105650977 [Jatropha curcas]
3 Hb_021888_120 0.1999015381 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
4 Hb_000096_130 0.2280902547 - - hypothetical protein 23 [Hevea brasiliensis]
5 Hb_011909_140 0.2392750072 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]
6 Hb_000483_480 0.2450755271 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000418_080 0.2539641259 - - PREDICTED: uncharacterized protein LOC105124652 [Populus euphratica]
8 Hb_002341_020 0.255007857 - - PREDICTED: pyruvate decarboxylase 2 [Populus euphratica]
9 Hb_004136_030 0.2582680671 - - -
10 Hb_021888_050 0.2603798537 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
11 Hb_001117_120 0.2617412855 - - chloride channel clc, putative [Ricinus communis]
12 Hb_005147_010 0.2646632454 - - PREDICTED: uncharacterized protein LOC105629670 [Jatropha curcas]
13 Hb_001022_040 0.2652522633 - - PREDICTED: uncharacterized protein LOC105634753 [Jatropha curcas]
14 Hb_000504_110 0.2661885987 - - F-box/LRR-repeat protein, putative [Ricinus communis]
15 Hb_006816_400 0.2687879675 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
16 Hb_140049_010 0.2688944294 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
17 Hb_000454_060 0.2690400738 - - Uncharacterized protein TCM_006778 [Theobroma cacao]
18 Hb_007317_080 0.2691704512 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
19 Hb_000692_020 0.2760456122 - - PREDICTED: E3 ubiquitin-protein ligase ATL23 [Jatropha curcas]
20 Hb_006502_050 0.2777911932 - - -

Gene co-expression network

sample Hb_007951_130 Hb_007951_130 Hb_139138_010 Hb_139138_010 Hb_007951_130--Hb_139138_010 Hb_021888_120 Hb_021888_120 Hb_007951_130--Hb_021888_120 Hb_000096_130 Hb_000096_130 Hb_007951_130--Hb_000096_130 Hb_011909_140 Hb_011909_140 Hb_007951_130--Hb_011909_140 Hb_000483_480 Hb_000483_480 Hb_007951_130--Hb_000483_480 Hb_000418_080 Hb_000418_080 Hb_007951_130--Hb_000418_080 Hb_005147_010 Hb_005147_010 Hb_139138_010--Hb_005147_010 Hb_139138_010--Hb_011909_140 Hb_001117_120 Hb_001117_120 Hb_139138_010--Hb_001117_120 Hb_139138_010--Hb_000483_480 Hb_128051_010 Hb_128051_010 Hb_139138_010--Hb_128051_010 Hb_007218_100 Hb_007218_100 Hb_021888_120--Hb_007218_100 Hb_021888_120--Hb_000096_130 Hb_007317_080 Hb_007317_080 Hb_021888_120--Hb_007317_080 Hb_000692_020 Hb_000692_020 Hb_021888_120--Hb_000692_020 Hb_002260_160 Hb_002260_160 Hb_021888_120--Hb_002260_160 Hb_000836_140 Hb_000836_140 Hb_000096_130--Hb_000836_140 Hb_013839_010 Hb_013839_010 Hb_000096_130--Hb_013839_010 Hb_002603_060 Hb_002603_060 Hb_000096_130--Hb_002603_060 Hb_002828_040 Hb_002828_040 Hb_000096_130--Hb_002828_040 Hb_002636_080 Hb_002636_080 Hb_000096_130--Hb_002636_080 Hb_021888_050 Hb_021888_050 Hb_000096_130--Hb_021888_050 Hb_001153_180 Hb_001153_180 Hb_011909_140--Hb_001153_180 Hb_002701_220 Hb_002701_220 Hb_011909_140--Hb_002701_220 Hb_000891_030 Hb_000891_030 Hb_011909_140--Hb_000891_030 Hb_000451_070 Hb_000451_070 Hb_011909_140--Hb_000451_070 Hb_088753_010 Hb_088753_010 Hb_011909_140--Hb_088753_010 Hb_061195_020 Hb_061195_020 Hb_011909_140--Hb_061195_020 Hb_000483_480--Hb_002603_060 Hb_000483_480--Hb_000692_020 Hb_004567_020 Hb_004567_020 Hb_000483_480--Hb_004567_020 Hb_001105_090 Hb_001105_090 Hb_000483_480--Hb_001105_090 Hb_008066_030 Hb_008066_030 Hb_000483_480--Hb_008066_030 Hb_000031_080 Hb_000031_080 Hb_000483_480--Hb_000031_080 Hb_000418_080--Hb_000891_030 Hb_140049_010 Hb_140049_010 Hb_000418_080--Hb_140049_010 Hb_006907_080 Hb_006907_080 Hb_000418_080--Hb_006907_080 Hb_029243_010 Hb_029243_010 Hb_000418_080--Hb_029243_010 Hb_001507_030 Hb_001507_030 Hb_000418_080--Hb_001507_030 Hb_003687_030 Hb_003687_030 Hb_000418_080--Hb_003687_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0162399 0.394533 0.0345178 0.108525 0 0.00573287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.59532 0.53874 0.0671834 0.171896 0.0499539

CAGE analysis