Hb_008032_010

Information

Type -
Description -
Location Contig8032: 22886-24183
Sequence    

Annotation

kegg
ID mdm:103407108
description salicylic acid-binding protein 2-like
nr
ID 2G4L
description Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
swissprot
ID P52704
description (S)-hydroxynitrile lyase OS=Hevea brasiliensis GN=HNL PE=1 SV=1
trembl
ID D1MX79
description (S)-hydroxynitrile lyase OS=Baliospermum montanum GN=bmhnl-h235a PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008032_010 0.0 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
2 Hb_006355_100 0.0171054797 - - hypothetical protein glysoja_002455 [Glycine soja]
3 Hb_132840_060 0.0180420045 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
4 Hb_003729_050 0.02555035 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
5 Hb_009189_090 0.0274563234 - - protein phosphatase-2c, putative [Ricinus communis]
6 Hb_000023_170 0.0358619432 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
7 Hb_155874_020 0.0436298149 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
8 Hb_003702_010 0.0521795904 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
9 Hb_008195_100 0.0583148519 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
10 Hb_002701_100 0.0595595707 transcription factor TF Family: MIKC PREDICTED: truncated transcription factor CAULIFLOWER A-like [Jatropha curcas]
11 Hb_005357_210 0.0716231214 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein MERISTEM L1 [Jatropha curcas]
12 Hb_001033_080 0.0727653773 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
13 Hb_000853_340 0.0768369699 - - PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X2 [Populus euphratica]
14 Hb_000173_330 0.0813001878 - - PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Vitis vinifera]
15 Hb_000016_140 0.0816899472 - - glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis]
16 Hb_005375_100 0.0821983133 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH57-like [Jatropha curcas]
17 Hb_000334_020 0.0838771107 - - PREDICTED: dynein light chain 2, cytoplasmic [Jatropha curcas]
18 Hb_017358_060 0.0873971606 - - PREDICTED: uncharacterized protein LOC105641510 [Jatropha curcas]
19 Hb_025048_050 0.0920324213 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
20 Hb_001401_050 0.0982193807 - - PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_008032_010 Hb_008032_010 Hb_006355_100 Hb_006355_100 Hb_008032_010--Hb_006355_100 Hb_132840_060 Hb_132840_060 Hb_008032_010--Hb_132840_060 Hb_003729_050 Hb_003729_050 Hb_008032_010--Hb_003729_050 Hb_009189_090 Hb_009189_090 Hb_008032_010--Hb_009189_090 Hb_000023_170 Hb_000023_170 Hb_008032_010--Hb_000023_170 Hb_155874_020 Hb_155874_020 Hb_008032_010--Hb_155874_020 Hb_006355_100--Hb_003729_050 Hb_006355_100--Hb_132840_060 Hb_006355_100--Hb_009189_090 Hb_002701_100 Hb_002701_100 Hb_006355_100--Hb_002701_100 Hb_006355_100--Hb_000023_170 Hb_132840_060--Hb_155874_020 Hb_132840_060--Hb_003729_050 Hb_132840_060--Hb_009189_090 Hb_132840_060--Hb_000023_170 Hb_003729_050--Hb_002701_100 Hb_003729_050--Hb_155874_020 Hb_003729_050--Hb_009189_090 Hb_009189_090--Hb_000023_170 Hb_003702_010 Hb_003702_010 Hb_009189_090--Hb_003702_010 Hb_005357_210 Hb_005357_210 Hb_009189_090--Hb_005357_210 Hb_000023_170--Hb_003702_010 Hb_000023_170--Hb_155874_020 Hb_000023_170--Hb_005357_210 Hb_000853_340 Hb_000853_340 Hb_155874_020--Hb_000853_340 Hb_155874_020--Hb_003702_010 Hb_008195_100 Hb_008195_100 Hb_155874_020--Hb_008195_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.10771 0.0531199 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.328174

CAGE analysis