Hb_008062_070

Information

Type -
Description -
Location Contig8062: 79996-82614
Sequence    

Annotation

kegg
ID egr:104416949
description L-type lectin-domain containing receptor kinase IX.1-like
nr
ID XP_012068410.1
description PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9H6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03649 PE=3 SV=1
Gene Ontology
ID GO:0030246
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59054: 25803-82840 , PASA_asmbl_59055: 82257-82822
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008062_070 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
2 Hb_010407_180 0.1308661602 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Jatropha curcas]
3 Hb_003582_040 0.1336202757 transcription factor TF Family: C2H2 hypothetical protein POPTR_0010s11160g [Populus trichocarpa]
4 Hb_000046_100 0.149393144 - - NADH dehydrogenase, putative [Ricinus communis]
5 Hb_004724_380 0.151060283 - - PREDICTED: cold-inducible RNA-binding protein B-like [Jatropha curcas]
6 Hb_065525_090 0.1528064972 - - PREDICTED: CASP-like protein 4C1 [Vitis vinifera]
7 Hb_011609_020 0.1545672396 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002798_050 0.1564582404 - - l-allo-threonine aldolase, putative [Ricinus communis]
9 Hb_004052_050 0.15734168 - - PREDICTED: uncharacterized protein LOC105640640 [Jatropha curcas]
10 Hb_000111_330 0.1594827734 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Jatropha curcas]
11 Hb_129204_030 0.1597118638 - - PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Jatropha curcas]
12 Hb_021409_160 0.1600017984 - - hypothetical protein POPTR_0001s11040g [Populus trichocarpa]
13 Hb_000155_200 0.1616612006 - - Rab7 [Hevea brasiliensis]
14 Hb_000103_320 0.1619347558 - - Stem-specific protein TSJT1, putative [Ricinus communis]
15 Hb_001616_030 0.1619576757 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Jatropha curcas]
16 Hb_029904_030 0.1628270417 - - aspartate aminotransferase, putative [Ricinus communis]
17 Hb_000120_960 0.1637992789 - - isocitrate dehydrogenase, putative [Ricinus communis]
18 Hb_000069_700 0.1652225878 - - hypothetical protein B456_005G003200 [Gossypium raimondii]
19 Hb_000115_220 0.1657637824 - - hypothetical protein CISIN_1g0379742mg, partial [Citrus sinensis]
20 Hb_000027_150 0.1663155229 - - mitochondrial carrier protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_008062_070 Hb_008062_070 Hb_010407_180 Hb_010407_180 Hb_008062_070--Hb_010407_180 Hb_003582_040 Hb_003582_040 Hb_008062_070--Hb_003582_040 Hb_000046_100 Hb_000046_100 Hb_008062_070--Hb_000046_100 Hb_004724_380 Hb_004724_380 Hb_008062_070--Hb_004724_380 Hb_065525_090 Hb_065525_090 Hb_008062_070--Hb_065525_090 Hb_011609_020 Hb_011609_020 Hb_008062_070--Hb_011609_020 Hb_000120_960 Hb_000120_960 Hb_010407_180--Hb_000120_960 Hb_001279_340 Hb_001279_340 Hb_010407_180--Hb_001279_340 Hb_000125_030 Hb_000125_030 Hb_010407_180--Hb_000125_030 Hb_000563_250 Hb_000563_250 Hb_010407_180--Hb_000563_250 Hb_005928_100 Hb_005928_100 Hb_010407_180--Hb_005928_100 Hb_010407_180--Hb_003582_040 Hb_000592_020 Hb_000592_020 Hb_003582_040--Hb_000592_020 Hb_000141_020 Hb_000141_020 Hb_003582_040--Hb_000141_020 Hb_000147_040 Hb_000147_040 Hb_003582_040--Hb_000147_040 Hb_000258_330 Hb_000258_330 Hb_003582_040--Hb_000258_330 Hb_005569_020 Hb_005569_020 Hb_003582_040--Hb_005569_020 Hb_021596_090 Hb_021596_090 Hb_000046_100--Hb_021596_090 Hb_000103_320 Hb_000103_320 Hb_000046_100--Hb_000103_320 Hb_007044_120 Hb_007044_120 Hb_000046_100--Hb_007044_120 Hb_006831_120 Hb_006831_120 Hb_000046_100--Hb_006831_120 Hb_001218_040 Hb_001218_040 Hb_000046_100--Hb_001218_040 Hb_028872_080 Hb_028872_080 Hb_000046_100--Hb_028872_080 Hb_000419_070 Hb_000419_070 Hb_004724_380--Hb_000419_070 Hb_007441_260 Hb_007441_260 Hb_004724_380--Hb_007441_260 Hb_000087_130 Hb_000087_130 Hb_004724_380--Hb_000087_130 Hb_001053_140 Hb_001053_140 Hb_004724_380--Hb_001053_140 Hb_000069_700 Hb_000069_700 Hb_004724_380--Hb_000069_700 Hb_072922_020 Hb_072922_020 Hb_004724_380--Hb_072922_020 Hb_002660_070 Hb_002660_070 Hb_065525_090--Hb_002660_070 Hb_034406_030 Hb_034406_030 Hb_065525_090--Hb_034406_030 Hb_001545_160 Hb_001545_160 Hb_065525_090--Hb_001545_160 Hb_020805_130 Hb_020805_130 Hb_065525_090--Hb_020805_130 Hb_002835_180 Hb_002835_180 Hb_065525_090--Hb_002835_180 Hb_065525_090--Hb_000120_960 Hb_000189_240 Hb_000189_240 Hb_011609_020--Hb_000189_240 Hb_010175_040 Hb_010175_040 Hb_011609_020--Hb_010175_040 Hb_003362_030 Hb_003362_030 Hb_011609_020--Hb_003362_030 Hb_011609_020--Hb_006831_120 Hb_004052_050 Hb_004052_050 Hb_011609_020--Hb_004052_050 Hb_000302_140 Hb_000302_140 Hb_011609_020--Hb_000302_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.84655 2.64634 2.99765 3.62794 2.02227 0.317227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.21697 8.26041 7.21785 1.25366 1.98062

CAGE analysis