Hb_008071_030

Information

Type -
Description -
Location Contig8071: 17312-18008
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008071_030 0.0 - - -
2 Hb_004466_010 0.1753186416 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
3 Hb_013394_010 0.2074479391 - - PREDICTED: laccase-14-like [Malus domestica]
4 Hb_011344_080 0.2081572315 - - -
5 Hb_005800_040 0.2346177394 - - -
6 Hb_001251_030 0.2521337176 - - hypothetical protein PHAVU_002G189800g [Phaseolus vulgaris]
7 Hb_001948_010 0.2598288463 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
8 Hb_006156_020 0.2627095867 - - -
9 Hb_000594_170 0.2632083506 - - -
10 Hb_002495_020 0.2901261345 - - hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]
11 Hb_001488_050 0.2922199741 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 29-like [Jatropha curcas]
12 Hb_000046_130 0.2931062427 - - Peroxidase 27 precursor, putative [Ricinus communis]
13 Hb_002240_030 0.2937156503 - - -
14 Hb_020805_020 0.2953416491 - - -
15 Hb_001433_010 0.2959488388 - - -
16 Hb_000395_100 0.2975091288 - - Protein MYG1, putative [Ricinus communis]
17 Hb_002392_060 0.302569105 - - gag/pol protein [Bryonia dioica]
18 Hb_002928_080 0.3027457921 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
19 Hb_100821_010 0.3042364612 - - hypothetical protein JCGZ_01613 [Jatropha curcas]
20 Hb_000757_080 0.3078479073 - - vacuolar ATP synthase subunit G plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_008071_030 Hb_008071_030 Hb_004466_010 Hb_004466_010 Hb_008071_030--Hb_004466_010 Hb_013394_010 Hb_013394_010 Hb_008071_030--Hb_013394_010 Hb_011344_080 Hb_011344_080 Hb_008071_030--Hb_011344_080 Hb_005800_040 Hb_005800_040 Hb_008071_030--Hb_005800_040 Hb_001251_030 Hb_001251_030 Hb_008071_030--Hb_001251_030 Hb_001948_010 Hb_001948_010 Hb_008071_030--Hb_001948_010 Hb_000395_100 Hb_000395_100 Hb_004466_010--Hb_000395_100 Hb_095413_040 Hb_095413_040 Hb_004466_010--Hb_095413_040 Hb_017836_010 Hb_017836_010 Hb_004466_010--Hb_017836_010 Hb_000926_220 Hb_000926_220 Hb_004466_010--Hb_000926_220 Hb_049438_010 Hb_049438_010 Hb_004466_010--Hb_049438_010 Hb_013394_010--Hb_011344_080 Hb_013394_010--Hb_005800_040 Hb_013394_010--Hb_001251_030 Hb_108854_010 Hb_108854_010 Hb_013394_010--Hb_108854_010 Hb_000594_170 Hb_000594_170 Hb_013394_010--Hb_000594_170 Hb_011344_080--Hb_005800_040 Hb_011344_080--Hb_001251_030 Hb_011344_080--Hb_108854_010 Hb_011344_080--Hb_000594_170 Hb_005800_040--Hb_001251_030 Hb_052761_010 Hb_052761_010 Hb_005800_040--Hb_052761_010 Hb_000739_090 Hb_000739_090 Hb_005800_040--Hb_000739_090 Hb_006156_020 Hb_006156_020 Hb_005800_040--Hb_006156_020 Hb_001251_030--Hb_052761_010 Hb_001251_030--Hb_000739_090 Hb_001251_030--Hb_006156_020 Hb_002495_020 Hb_002495_020 Hb_001948_010--Hb_002495_020 Hb_001488_050 Hb_001488_050 Hb_001948_010--Hb_001488_050 Hb_000046_130 Hb_000046_130 Hb_001948_010--Hb_000046_130 Hb_002240_030 Hb_002240_030 Hb_001948_010--Hb_002240_030 Hb_020805_020 Hb_020805_020 Hb_001948_010--Hb_020805_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.35705 0 0 0 1.19024 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.98203 0

CAGE analysis