Hb_008078_020

Information

Type -
Description -
Location Contig8078: 22748-35138
Sequence    

Annotation

kegg
ID pop:POPTR_0011s10430g
description hypothetical protein
nr
ID KDP44797.1
description hypothetical protein JCGZ_01297 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067L8T1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01297 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59068: 25558-25835
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008078_020 0.0 - - hypothetical protein JCGZ_01297 [Jatropha curcas]
2 Hb_000297_100 0.1685045413 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
3 Hb_005545_080 0.1982424453 - - hypothetical protein JCGZ_01293 [Jatropha curcas]
4 Hb_000307_110 0.2019162395 - - hypothetical protein JCGZ_08160 [Jatropha curcas]
5 Hb_125884_010 0.2047285302 - - PREDICTED: metalloendoproteinase 1-like [Jatropha curcas]
6 Hb_000649_160 0.207214788 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
7 Hb_005656_200 0.2120591316 - - Cation transport protein chaC, putative [Ricinus communis]
8 Hb_141990_050 0.2125395961 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
9 Hb_011232_010 0.2149849032 - - Leucine-rich repeat receptor-like protein kinase family protein [Theobroma cacao]
10 Hb_001511_270 0.2161993138 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
11 Hb_001677_130 0.2178387707 - - hypothetical protein POPTR_0081s002101g, partial [Populus trichocarpa]
12 Hb_000117_110 0.221091753 - - transferase, putative [Ricinus communis]
13 Hb_078901_010 0.2225666727 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
14 Hb_009189_010 0.2247551356 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
15 Hb_002097_120 0.226818351 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_001477_080 0.2273190668 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
17 Hb_009476_010 0.2278727384 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
18 Hb_000398_200 0.2286230342 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
19 Hb_000247_150 0.2288426181 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Jatropha curcas]
20 Hb_000422_050 0.2301030936 - - PREDICTED: probable CCR4-associated factor 1 homolog 9 [Jatropha curcas]

Gene co-expression network

sample Hb_008078_020 Hb_008078_020 Hb_000297_100 Hb_000297_100 Hb_008078_020--Hb_000297_100 Hb_005545_080 Hb_005545_080 Hb_008078_020--Hb_005545_080 Hb_000307_110 Hb_000307_110 Hb_008078_020--Hb_000307_110 Hb_125884_010 Hb_125884_010 Hb_008078_020--Hb_125884_010 Hb_000649_160 Hb_000649_160 Hb_008078_020--Hb_000649_160 Hb_005656_200 Hb_005656_200 Hb_008078_020--Hb_005656_200 Hb_002284_020 Hb_002284_020 Hb_000297_100--Hb_002284_020 Hb_000297_100--Hb_000307_110 Hb_000297_100--Hb_005545_080 Hb_001568_060 Hb_001568_060 Hb_000297_100--Hb_001568_060 Hb_141990_050 Hb_141990_050 Hb_000297_100--Hb_141990_050 Hb_004712_140 Hb_004712_140 Hb_000297_100--Hb_004712_140 Hb_005545_080--Hb_004712_140 Hb_000117_110 Hb_000117_110 Hb_005545_080--Hb_000117_110 Hb_004924_030 Hb_004924_030 Hb_005545_080--Hb_004924_030 Hb_010327_010 Hb_010327_010 Hb_005545_080--Hb_010327_010 Hb_001677_130 Hb_001677_130 Hb_005545_080--Hb_001677_130 Hb_000181_080 Hb_000181_080 Hb_000307_110--Hb_000181_080 Hb_000307_110--Hb_002284_020 Hb_003086_050 Hb_003086_050 Hb_000307_110--Hb_003086_050 Hb_041290_030 Hb_041290_030 Hb_000307_110--Hb_041290_030 Hb_000103_400 Hb_000103_400 Hb_000307_110--Hb_000103_400 Hb_000245_270 Hb_000245_270 Hb_125884_010--Hb_000245_270 Hb_004143_050 Hb_004143_050 Hb_125884_010--Hb_004143_050 Hb_003023_080 Hb_003023_080 Hb_125884_010--Hb_003023_080 Hb_000506_130 Hb_000506_130 Hb_125884_010--Hb_000506_130 Hb_029238_020 Hb_029238_020 Hb_125884_010--Hb_029238_020 Hb_000805_150 Hb_000805_150 Hb_125884_010--Hb_000805_150 Hb_029866_050 Hb_029866_050 Hb_000649_160--Hb_029866_050 Hb_006698_020 Hb_006698_020 Hb_000649_160--Hb_006698_020 Hb_001104_270 Hb_001104_270 Hb_000649_160--Hb_001104_270 Hb_001568_120 Hb_001568_120 Hb_000649_160--Hb_001568_120 Hb_013720_010 Hb_013720_010 Hb_000649_160--Hb_013720_010 Hb_007254_050 Hb_007254_050 Hb_000649_160--Hb_007254_050 Hb_000422_050 Hb_000422_050 Hb_005656_200--Hb_000422_050 Hb_009476_010 Hb_009476_010 Hb_005656_200--Hb_009476_010 Hb_007441_150 Hb_007441_150 Hb_005656_200--Hb_007441_150 Hb_000032_230 Hb_000032_230 Hb_005656_200--Hb_000032_230 Hb_001894_060 Hb_001894_060 Hb_005656_200--Hb_001894_060 Hb_032260_100 Hb_032260_100 Hb_005656_200--Hb_032260_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.133526 0.0180484 0.0210816 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0172298 0 0.00341228 0.0184588

CAGE analysis