Hb_008092_090

Information

Type -
Description -
Location Contig8092: 103226-105401
Sequence    

Annotation

kegg
ID tcc:TCM_037833
description hypothetical protein
nr
ID XP_012076743.1
description PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPK9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008092_090 0.0 - - PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
2 Hb_004592_020 0.1125119784 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
3 Hb_028013_010 0.1154199029 - - alcohol dehydrogenase, putative [Ricinus communis]
4 Hb_001675_210 0.115508662 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
5 Hb_012652_020 0.115508897 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
6 Hb_000419_080 0.1171932984 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
7 Hb_094462_010 0.1178939858 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
8 Hb_000488_040 0.1189305695 - - unnamed protein product [Vitis vinifera]
9 Hb_000022_270 0.1191310719 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003685_060 0.1196038913 - - PREDICTED: laccase-15 [Jatropha curcas]
11 Hb_001604_140 0.1201893871 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
12 Hb_001032_060 0.1208459894 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
13 Hb_000201_080 0.1212966626 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_126040_020 0.1226580586 - - -
15 Hb_000563_070 0.1236443675 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
16 Hb_005747_020 0.1271126101 - - bacterial-induced peroxidase [Gossypium schwendimanii]
17 Hb_000264_250 0.127342349 - - thioredoxin family protein [Arabidopsis thaliana]
18 Hb_003446_030 0.1283771533 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
19 Hb_000445_020 0.1290887356 - - GABA-specific permease, putative [Ricinus communis]
20 Hb_018709_010 0.1302742741 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]

Gene co-expression network

sample Hb_008092_090 Hb_008092_090 Hb_004592_020 Hb_004592_020 Hb_008092_090--Hb_004592_020 Hb_028013_010 Hb_028013_010 Hb_008092_090--Hb_028013_010 Hb_001675_210 Hb_001675_210 Hb_008092_090--Hb_001675_210 Hb_012652_020 Hb_012652_020 Hb_008092_090--Hb_012652_020 Hb_000419_080 Hb_000419_080 Hb_008092_090--Hb_000419_080 Hb_094462_010 Hb_094462_010 Hb_008092_090--Hb_094462_010 Hb_000488_040 Hb_000488_040 Hb_004592_020--Hb_000488_040 Hb_002900_020 Hb_002900_020 Hb_004592_020--Hb_002900_020 Hb_001032_060 Hb_001032_060 Hb_004592_020--Hb_001032_060 Hb_004592_020--Hb_000419_080 Hb_000483_020 Hb_000483_020 Hb_004592_020--Hb_000483_020 Hb_018709_010 Hb_018709_010 Hb_004592_020--Hb_018709_010 Hb_028013_010--Hb_018709_010 Hb_020141_020 Hb_020141_020 Hb_028013_010--Hb_020141_020 Hb_028013_010--Hb_001032_060 Hb_000025_250 Hb_000025_250 Hb_028013_010--Hb_000025_250 Hb_100786_010 Hb_100786_010 Hb_028013_010--Hb_100786_010 Hb_028013_010--Hb_000419_080 Hb_001604_140 Hb_001604_140 Hb_001675_210--Hb_001604_140 Hb_003685_060 Hb_003685_060 Hb_001675_210--Hb_003685_060 Hb_000022_270 Hb_000022_270 Hb_001675_210--Hb_000022_270 Hb_000201_080 Hb_000201_080 Hb_001675_210--Hb_000201_080 Hb_126040_020 Hb_126040_020 Hb_001675_210--Hb_126040_020 Hb_001675_210--Hb_094462_010 Hb_008367_020 Hb_008367_020 Hb_012652_020--Hb_008367_020 Hb_001410_090 Hb_001410_090 Hb_012652_020--Hb_001410_090 Hb_012652_020--Hb_000488_040 Hb_001114_290 Hb_001114_290 Hb_012652_020--Hb_001114_290 Hb_005747_040 Hb_005747_040 Hb_012652_020--Hb_005747_040 Hb_106528_010 Hb_106528_010 Hb_012652_020--Hb_106528_010 Hb_000419_080--Hb_094462_010 Hb_000419_080--Hb_001032_060 Hb_000563_070 Hb_000563_070 Hb_000419_080--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_000419_080--Hb_000264_250 Hb_005747_020 Hb_005747_020 Hb_000419_080--Hb_005747_020 Hb_000419_080--Hb_000022_270 Hb_094462_010--Hb_000563_070 Hb_094462_010--Hb_000022_270 Hb_094462_010--Hb_003685_060 Hb_094462_010--Hb_000264_250 Hb_094462_010--Hb_001604_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.113517 0.951779 0 0.0158006 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0864875 0.0340149 0.126197 12.4806 0

CAGE analysis