Hb_008140_060

Information

Type -
Description -
Location Contig8140: 23459-25568
Sequence    

Annotation

kegg
ID tcc:TCM_045122
description Cytochrome P450, putative
nr
ID XP_007010974.1
description Cytochrome P450, putative [Theobroma cacao]
swissprot
ID O81970
description Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1
trembl
ID A0A061FYB4
description Cytochrome P450, putative OS=Theobroma cacao GN=TCM_045122 PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 83b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008140_060 0.0 - - Cytochrome P450, putative [Theobroma cacao]
2 Hb_094637_010 0.0690779429 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
3 Hb_000934_290 0.0729957719 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000844_100 0.0847629465 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
5 Hb_001158_080 0.0983317501 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
6 Hb_088916_010 0.102684136 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
7 Hb_002551_090 0.1048475469 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
8 Hb_012807_140 0.1120474202 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
9 Hb_050241_010 0.1173584144 - - PREDICTED: uncharacterized protein LOC105129233 isoform X1 [Populus euphratica]
10 Hb_009581_050 0.1183827918 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
11 Hb_002391_350 0.1210931966 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
12 Hb_003788_010 0.1214511162 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
13 Hb_003807_020 0.1230100121 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
14 Hb_012807_060 0.1254802099 - - ABC transporter family protein [Hevea brasiliensis]
15 Hb_182021_010 0.1261906243 - - sucrose transporter 4 [Hevea brasiliensis]
16 Hb_000335_050 0.127802822 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
17 Hb_004712_020 0.1281866725 - - hypothetical protein JCGZ_00782 [Jatropha curcas]
18 Hb_039496_010 0.1292645443 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
19 Hb_000852_050 0.1297163123 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
20 Hb_001638_110 0.1300663755 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_008140_060 Hb_008140_060 Hb_094637_010 Hb_094637_010 Hb_008140_060--Hb_094637_010 Hb_000934_290 Hb_000934_290 Hb_008140_060--Hb_000934_290 Hb_000844_100 Hb_000844_100 Hb_008140_060--Hb_000844_100 Hb_001158_080 Hb_001158_080 Hb_008140_060--Hb_001158_080 Hb_088916_010 Hb_088916_010 Hb_008140_060--Hb_088916_010 Hb_002551_090 Hb_002551_090 Hb_008140_060--Hb_002551_090 Hb_094637_010--Hb_000934_290 Hb_009581_050 Hb_009581_050 Hb_094637_010--Hb_009581_050 Hb_001638_110 Hb_001638_110 Hb_094637_010--Hb_001638_110 Hb_000000_060 Hb_000000_060 Hb_094637_010--Hb_000000_060 Hb_039496_010 Hb_039496_010 Hb_094637_010--Hb_039496_010 Hb_003788_010 Hb_003788_010 Hb_000934_290--Hb_003788_010 Hb_000934_290--Hb_039496_010 Hb_000934_290--Hb_001158_080 Hb_003787_060 Hb_003787_060 Hb_000934_290--Hb_003787_060 Hb_000740_130 Hb_000740_130 Hb_000844_100--Hb_000740_130 Hb_182021_010 Hb_182021_010 Hb_000844_100--Hb_182021_010 Hb_000844_100--Hb_001158_080 Hb_002173_060 Hb_002173_060 Hb_000844_100--Hb_002173_060 Hb_000844_100--Hb_094637_010 Hb_001158_080--Hb_002551_090 Hb_184942_010 Hb_184942_010 Hb_001158_080--Hb_184942_010 Hb_009642_010 Hb_009642_010 Hb_001158_080--Hb_009642_010 Hb_001158_080--Hb_003787_060 Hb_001838_050 Hb_001838_050 Hb_088916_010--Hb_001838_050 Hb_088916_010--Hb_000740_130 Hb_000920_360 Hb_000920_360 Hb_088916_010--Hb_000920_360 Hb_001105_200 Hb_001105_200 Hb_088916_010--Hb_001105_200 Hb_088916_010--Hb_182021_010 Hb_012807_060 Hb_012807_060 Hb_002551_090--Hb_012807_060 Hb_002551_090--Hb_000934_290 Hb_003052_120 Hb_003052_120 Hb_002551_090--Hb_003052_120 Hb_022501_020 Hb_022501_020 Hb_002551_090--Hb_022501_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0462174 2.8165 0.283989 1.98076 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.1218 0.786036

CAGE analysis