Hb_008143_010

Information

Type -
Description -
Location Contig8143: 426-5129
Sequence    

Annotation

kegg
ID pop:POPTR_0003s18490g
description POPTRDRAFT_854085; putative wall-associated kinase family protein
nr
ID XP_012067451.1
description PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
swissprot
ID Q9SA25
description Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1
trembl
ID A0A067LBR0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26948 PE=4 SV=1
Gene Ontology
ID GO:0016772
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008143_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
2 Hb_002762_050 0.0929974173 - - PREDICTED: uncharacterized protein LOC105640359 [Jatropha curcas]
3 Hb_000574_010 0.0987717699 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
4 Hb_012807_030 0.099964033 - - PREDICTED: uncharacterized protein LOC105628042 isoform X1 [Jatropha curcas]
5 Hb_000675_010 0.102789125 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
6 Hb_003536_020 0.1060392527 - - PREDICTED: splicing factor 3A subunit 2 [Jatropha curcas]
7 Hb_000483_430 0.108703599 - - -
8 Hb_080922_010 0.1109088263 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
9 Hb_015978_090 0.1144220817 - - hypothetical protein POPTR_0014s11700g [Populus trichocarpa]
10 Hb_000483_440 0.1152101805 - - conserved hypothetical protein [Ricinus communis]
11 Hb_012389_010 0.1156119043 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
12 Hb_000694_080 0.1189915044 - - phosphoribulose kinase, putative [Ricinus communis]
13 Hb_000017_210 0.119001683 - - PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
14 Hb_000705_010 0.1191063133 - - hypothetical protein CICLE_v10027296mg [Citrus clementina]
15 Hb_087599_010 0.1198480102 - - PREDICTED: tropinone reductase homolog [Solanum tuberosum]
16 Hb_000041_210 0.120696999 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
17 Hb_015824_010 0.1220830535 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
18 Hb_007426_070 0.1227509115 - - PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase [Jatropha curcas]
19 Hb_011104_020 0.1234164056 - - PREDICTED: ABC transporter B family member 2-like [Jatropha curcas]
20 Hb_001300_240 0.1240252548 - - shikimate dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_008143_010 Hb_008143_010 Hb_002762_050 Hb_002762_050 Hb_008143_010--Hb_002762_050 Hb_000574_010 Hb_000574_010 Hb_008143_010--Hb_000574_010 Hb_012807_030 Hb_012807_030 Hb_008143_010--Hb_012807_030 Hb_000675_010 Hb_000675_010 Hb_008143_010--Hb_000675_010 Hb_003536_020 Hb_003536_020 Hb_008143_010--Hb_003536_020 Hb_000483_430 Hb_000483_430 Hb_008143_010--Hb_000483_430 Hb_087599_010 Hb_087599_010 Hb_002762_050--Hb_087599_010 Hb_002762_050--Hb_012807_030 Hb_000008_160 Hb_000008_160 Hb_002762_050--Hb_000008_160 Hb_000694_080 Hb_000694_080 Hb_002762_050--Hb_000694_080 Hb_003777_080 Hb_003777_080 Hb_002762_050--Hb_003777_080 Hb_156093_010 Hb_156093_010 Hb_002762_050--Hb_156093_010 Hb_002701_060 Hb_002701_060 Hb_000574_010--Hb_002701_060 Hb_005575_010 Hb_005575_010 Hb_000574_010--Hb_005575_010 Hb_010678_010 Hb_010678_010 Hb_000574_010--Hb_010678_010 Hb_006053_020 Hb_006053_020 Hb_000574_010--Hb_006053_020 Hb_015978_090 Hb_015978_090 Hb_000574_010--Hb_015978_090 Hb_124677_010 Hb_124677_010 Hb_012807_030--Hb_124677_010 Hb_000002_140 Hb_000002_140 Hb_012807_030--Hb_000002_140 Hb_012807_030--Hb_000008_160 Hb_000866_060 Hb_000866_060 Hb_012807_030--Hb_000866_060 Hb_000128_040 Hb_000128_040 Hb_012807_030--Hb_000128_040 Hb_000041_210 Hb_000041_210 Hb_000675_010--Hb_000041_210 Hb_012389_010 Hb_012389_010 Hb_000675_010--Hb_012389_010 Hb_002943_020 Hb_002943_020 Hb_000675_010--Hb_002943_020 Hb_002073_150 Hb_002073_150 Hb_000675_010--Hb_002073_150 Hb_000675_010--Hb_000483_430 Hb_131876_010 Hb_131876_010 Hb_000675_010--Hb_131876_010 Hb_080922_010 Hb_080922_010 Hb_003536_020--Hb_080922_010 Hb_007477_060 Hb_007477_060 Hb_003536_020--Hb_007477_060 Hb_000101_330 Hb_000101_330 Hb_003536_020--Hb_000101_330 Hb_001699_140 Hb_001699_140 Hb_003536_020--Hb_001699_140 Hb_002871_180 Hb_002871_180 Hb_003536_020--Hb_002871_180 Hb_000116_090 Hb_000116_090 Hb_003536_020--Hb_000116_090 Hb_011104_020 Hb_011104_020 Hb_000483_430--Hb_011104_020 Hb_000483_430--Hb_002073_150 Hb_000483_430--Hb_012389_010 Hb_000483_430--Hb_000041_210 Hb_004994_030 Hb_004994_030 Hb_000483_430--Hb_004994_030 Hb_000023_130 Hb_000023_130 Hb_000483_430--Hb_000023_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0168804 0.139111 0.0343275 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0293049 0.225078

CAGE analysis