Hb_008143_060

Information

Type -
Description -
Location Contig8143: 80299-85281
Sequence    

Annotation

kegg
ID cit:102621061
description putative hydrolase C777.06c-like
nr
ID XP_012092556.1
description PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
swissprot
ID O74545
description Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
trembl
ID A0A067JLR8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05299 PE=4 SV=1
Gene Ontology
ID GO:0016787
description hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59319: 83167-86455
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008143_060 0.0 - - PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
2 Hb_001195_740 0.0856663632 transcription factor TF Family: LIM PREDICTED: protein DA1 isoform X1 [Jatropha curcas]
3 Hb_006711_040 0.099341318 - - PREDICTED: probable protein ABIL5 [Jatropha curcas]
4 Hb_001832_140 0.1003571671 - - endomembrane protein 70 family protein [Medicago truncatula]
5 Hb_001252_050 0.1119031152 - - Wall-associated receptor kinase-like 20 [Morus notabilis]
6 Hb_000696_250 0.1147230215 - - PREDICTED: patellin-6 [Jatropha curcas]
7 Hb_000465_130 0.1204044648 transcription factor TF Family: ERF hypothetical protein POPTR_0001s15550g [Populus trichocarpa]
8 Hb_000749_120 0.1206074802 - - PREDICTED: uncharacterized protein LOC105644255 isoform X2 [Jatropha curcas]
9 Hb_004846_080 0.1226376024 - - DNA replication licensing factor MCM3, putative [Ricinus communis]
10 Hb_000343_220 0.1251864833 - - hypothetical protein CISIN_1g037489mg [Citrus sinensis]
11 Hb_000490_040 0.131613046 - - PREDICTED: cyclin-D3-1 [Jatropha curcas]
12 Hb_027556_060 0.135546203 - - hypothetical protein POPTR_0001s03520g [Populus trichocarpa]
13 Hb_009767_030 0.1357802674 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
14 Hb_000417_140 0.1381270137 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
15 Hb_000272_010 0.1406758709 - - PREDICTED: DNA replication licensing factor MCM5 [Jatropha curcas]
16 Hb_001157_190 0.1421121599 - - PREDICTED: protein YLS3 [Jatropha curcas]
17 Hb_001776_070 0.14585008 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
18 Hb_001252_070 0.1503078289 - - hypothetical protein JCGZ_01385 [Jatropha curcas]
19 Hb_003189_010 0.1519581565 - - hypothetical protein EUGRSUZ_G02605 [Eucalyptus grandis]
20 Hb_000696_030 0.1526365446 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_008143_060 Hb_008143_060 Hb_001195_740 Hb_001195_740 Hb_008143_060--Hb_001195_740 Hb_006711_040 Hb_006711_040 Hb_008143_060--Hb_006711_040 Hb_001832_140 Hb_001832_140 Hb_008143_060--Hb_001832_140 Hb_001252_050 Hb_001252_050 Hb_008143_060--Hb_001252_050 Hb_000696_250 Hb_000696_250 Hb_008143_060--Hb_000696_250 Hb_000465_130 Hb_000465_130 Hb_008143_060--Hb_000465_130 Hb_001157_190 Hb_001157_190 Hb_001195_740--Hb_001157_190 Hb_002918_120 Hb_002918_120 Hb_001195_740--Hb_002918_120 Hb_001195_740--Hb_001832_140 Hb_001195_740--Hb_000696_250 Hb_000696_030 Hb_000696_030 Hb_001195_740--Hb_000696_030 Hb_000343_220 Hb_000343_220 Hb_006711_040--Hb_000343_220 Hb_000490_040 Hb_000490_040 Hb_006711_040--Hb_000490_040 Hb_006711_040--Hb_001252_050 Hb_006711_040--Hb_001832_140 Hb_000272_010 Hb_000272_010 Hb_006711_040--Hb_000272_010 Hb_001832_140--Hb_000696_250 Hb_001832_140--Hb_001252_050 Hb_001832_140--Hb_000465_130 Hb_001252_050--Hb_000343_220 Hb_008143_050 Hb_008143_050 Hb_001252_050--Hb_008143_050 Hb_001252_050--Hb_000696_250 Hb_000417_140 Hb_000417_140 Hb_001252_050--Hb_000417_140 Hb_000018_120 Hb_000018_120 Hb_000696_250--Hb_000018_120 Hb_001349_020 Hb_001349_020 Hb_000696_250--Hb_001349_020 Hb_009767_030 Hb_009767_030 Hb_000696_250--Hb_009767_030 Hb_022092_050 Hb_022092_050 Hb_000696_250--Hb_022092_050 Hb_004846_080 Hb_004846_080 Hb_000465_130--Hb_004846_080 Hb_000465_130--Hb_001195_740 Hb_001776_070 Hb_001776_070 Hb_000465_130--Hb_001776_070 Hb_000465_130--Hb_001252_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0167241 0.152859 1.43682 1.27179 0 0.0346705
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0300282 0 1.17776 0.311585

CAGE analysis