Hb_008173_100

Information

Type -
Description -
Location Contig8173: 49851-50354
Sequence    

Annotation

kegg
ID rcu:RCOM_1686500
description Kiwellin, putative
nr
ID XP_002509793.1
description Kiwellin, putative [Ricinus communis]
swissprot
ID Q6H5X0
description Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1
trembl
ID B9RCA9
description Kiwellin, putative OS=Ricinus communis GN=RCOM_1686500 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008173_100 0.0 - - Kiwellin, putative [Ricinus communis]
2 Hb_001649_120 0.3086866361 - - -
3 Hb_002345_080 0.3140300327 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_003228_070 0.3222572896 - - conserved hypothetical protein [Ricinus communis]
5 Hb_136850_040 0.3401046234 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_004607_100 0.3496223684 - - PREDICTED: uncharacterized protein LOC103445866 [Malus domestica]
7 Hb_000173_200 0.3634971001 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008221_130 0.3653946614 - - hypothetical protein VITISV_016971 [Vitis vinifera]
9 Hb_010049_020 0.365852252 - - retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group]
10 Hb_004800_050 0.3695134771 - - PREDICTED: uncharacterized protein LOC105643859 [Jatropha curcas]
11 Hb_040948_020 0.3705463801 - - -
12 Hb_000062_010 0.3893016682 - - Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
13 Hb_003939_020 0.3927655601 - - PREDICTED: zinc finger protein KNUCKLES [Jatropha curcas]
14 Hb_032990_020 0.3977424782 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000510_220 0.402564237 - - -
16 Hb_001638_100 0.4028851851 - - PREDICTED: probable protein S-acyltransferase 12 [Vitis vinifera]
17 Hb_000225_050 0.4054874471 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_001501_040 0.4069481904 - - PREDICTED: uncharacterized protein LOC102663792 [Glycine max]
19 Hb_078160_010 0.408248537 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
20 Hb_003405_040 0.4098073704 - - PREDICTED: uncharacterized protein LOC105121978 [Populus euphratica]

Gene co-expression network

sample Hb_008173_100 Hb_008173_100 Hb_001649_120 Hb_001649_120 Hb_008173_100--Hb_001649_120 Hb_002345_080 Hb_002345_080 Hb_008173_100--Hb_002345_080 Hb_003228_070 Hb_003228_070 Hb_008173_100--Hb_003228_070 Hb_136850_040 Hb_136850_040 Hb_008173_100--Hb_136850_040 Hb_004607_100 Hb_004607_100 Hb_008173_100--Hb_004607_100 Hb_000173_200 Hb_000173_200 Hb_008173_100--Hb_000173_200 Hb_000111_220 Hb_000111_220 Hb_001649_120--Hb_000111_220 Hb_000220_140 Hb_000220_140 Hb_001649_120--Hb_000220_140 Hb_001649_120--Hb_004607_100 Hb_004460_040 Hb_004460_040 Hb_001649_120--Hb_004460_040 Hb_003747_110 Hb_003747_110 Hb_001649_120--Hb_003747_110 Hb_040948_020 Hb_040948_020 Hb_002345_080--Hb_040948_020 Hb_004800_050 Hb_004800_050 Hb_002345_080--Hb_004800_050 Hb_002345_080--Hb_004607_100 Hb_001638_100 Hb_001638_100 Hb_002345_080--Hb_001638_100 Hb_002345_080--Hb_003228_070 Hb_001501_040 Hb_001501_040 Hb_002345_080--Hb_001501_040 Hb_003228_070--Hb_000173_200 Hb_003228_070--Hb_136850_040 Hb_003228_070--Hb_004607_100 Hb_003939_020 Hb_003939_020 Hb_003228_070--Hb_003939_020 Hb_000836_590 Hb_000836_590 Hb_003228_070--Hb_000836_590 Hb_136850_040--Hb_000173_200 Hb_000184_080 Hb_000184_080 Hb_136850_040--Hb_000184_080 Hb_136850_040--Hb_003939_020 Hb_009773_040 Hb_009773_040 Hb_136850_040--Hb_009773_040 Hb_000336_300 Hb_000336_300 Hb_136850_040--Hb_000336_300 Hb_000230_070 Hb_000230_070 Hb_004607_100--Hb_000230_070 Hb_143643_010 Hb_143643_010 Hb_004607_100--Hb_143643_010 Hb_004607_100--Hb_000111_220 Hb_004607_100--Hb_004800_050 Hb_000173_200--Hb_000836_590 Hb_001373_120 Hb_001373_120 Hb_000173_200--Hb_001373_120 Hb_003766_030 Hb_003766_030 Hb_000173_200--Hb_003766_030 Hb_008637_010 Hb_008637_010 Hb_000173_200--Hb_008637_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.434962 0.242827 0 0.296392 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.189502 0 0

CAGE analysis