Hb_008202_010

Information

Type -
Description -
Location Contig8202: 3586-4558
Sequence    

Annotation

kegg
ID rcu:RCOM_1579680
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.23)
nr
ID XP_002513561.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q54XQ2
description RGS domain-containing serine/threonine-protein kinase A OS=Dictyostelium discoideum GN=rckA PE=1 SV=1
trembl
ID B9RIJ2
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1579680 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59583: 4116-4644
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008202_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_029584_110 0.0907060291 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
3 Hb_135714_010 0.0946909111 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
4 Hb_005888_050 0.0967124364 - - ATP binding protein, putative [Ricinus communis]
5 Hb_003970_010 0.098151859 - - PREDICTED: sigma factor binding protein 1, chloroplastic-like [Populus euphratica]
6 Hb_002596_090 0.1026602922 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]
7 Hb_111997_010 0.1026697788 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
8 Hb_006188_020 0.1084854679 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
9 Hb_074966_010 0.1123830536 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
10 Hb_026016_010 0.1166384649 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_010904_010 0.1182169904 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
12 Hb_002477_200 0.1203063553 - - PREDICTED: uncharacterized protein LOC105631678 [Jatropha curcas]
13 Hb_031685_010 0.126817233 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_000110_040 0.1269528272 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
15 Hb_000656_260 0.1279921895 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
16 Hb_000340_380 0.129104722 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
17 Hb_000732_160 0.1297640356 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_001677_170 0.132992941 - - hypothetical protein M569_03661, partial [Genlisea aurea]
19 Hb_005486_020 0.1332200829 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
20 Hb_003029_010 0.1341656356 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_008202_010 Hb_008202_010 Hb_029584_110 Hb_029584_110 Hb_008202_010--Hb_029584_110 Hb_135714_010 Hb_135714_010 Hb_008202_010--Hb_135714_010 Hb_005888_050 Hb_005888_050 Hb_008202_010--Hb_005888_050 Hb_003970_010 Hb_003970_010 Hb_008202_010--Hb_003970_010 Hb_002596_090 Hb_002596_090 Hb_008202_010--Hb_002596_090 Hb_111997_010 Hb_111997_010 Hb_008202_010--Hb_111997_010 Hb_000656_260 Hb_000656_260 Hb_029584_110--Hb_000656_260 Hb_003029_010 Hb_003029_010 Hb_029584_110--Hb_003029_010 Hb_029584_110--Hb_002596_090 Hb_183025_010 Hb_183025_010 Hb_029584_110--Hb_183025_010 Hb_026016_010 Hb_026016_010 Hb_029584_110--Hb_026016_010 Hb_135714_010--Hb_005888_050 Hb_074966_010 Hb_074966_010 Hb_135714_010--Hb_074966_010 Hb_005227_030 Hb_005227_030 Hb_135714_010--Hb_005227_030 Hb_031685_010 Hb_031685_010 Hb_135714_010--Hb_031685_010 Hb_000343_050 Hb_000343_050 Hb_135714_010--Hb_000343_050 Hb_005888_050--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_005888_050--Hb_001926_020 Hb_005888_050--Hb_031685_010 Hb_006188_020 Hb_006188_020 Hb_005888_050--Hb_006188_020 Hb_002211_020 Hb_002211_020 Hb_003970_010--Hb_002211_020 Hb_010904_010 Hb_010904_010 Hb_003970_010--Hb_010904_010 Hb_000031_320 Hb_000031_320 Hb_003970_010--Hb_000031_320 Hb_000110_040 Hb_000110_040 Hb_003970_010--Hb_000110_040 Hb_046739_010 Hb_046739_010 Hb_003970_010--Hb_046739_010 Hb_002596_090--Hb_003029_010 Hb_028487_040 Hb_028487_040 Hb_002596_090--Hb_028487_040 Hb_005486_020 Hb_005486_020 Hb_002596_090--Hb_005486_020 Hb_029095_010 Hb_029095_010 Hb_002596_090--Hb_029095_010 Hb_000152_410 Hb_000152_410 Hb_002596_090--Hb_000152_410 Hb_111997_010--Hb_074966_010 Hb_111997_010--Hb_006188_020 Hb_001677_170 Hb_001677_170 Hb_111997_010--Hb_001677_170 Hb_001606_010 Hb_001606_010 Hb_111997_010--Hb_001606_010 Hb_059318_010 Hb_059318_010 Hb_111997_010--Hb_059318_010 Hb_001926_070 Hb_001926_070 Hb_111997_010--Hb_001926_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0250138 5.3224 7.86663 2.16238 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0573956 0 0 0.436767 5.04012

CAGE analysis