Hb_008221_120

Information

Type -
Description -
Location Contig8221: 55495-56993
Sequence    

Annotation

kegg
ID vvi:100245479
description GDSL esterase/lipase EXL3
nr
ID XP_012073885.1
description PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
swissprot
ID Q9ZUE4
description GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1
trembl
ID E6NTZ1
description JHL20J20.8 protein OS=Jatropha curcas GN=JHL20J20.8 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase exl3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008221_120 0.0 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
2 Hb_005305_190 0.0404200448 transcription factor TF Family: NAC -
3 Hb_005952_020 0.1044975118 - - -
4 Hb_005779_070 0.105713498 - - -
5 Hb_010589_100 0.1113580342 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
6 Hb_000976_370 0.2440304223 - - beta-glucosidase, putative [Ricinus communis]
7 Hb_120112_010 0.2454087652 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
8 Hb_008689_020 0.2465745173 - - conserved hypothetical protein [Ricinus communis]
9 Hb_106496_010 0.2528442676 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
10 Hb_000445_240 0.2609884057 - - conserved hypothetical protein [Ricinus communis]
11 Hb_007140_010 0.2671481695 - - -
12 Hb_172179_010 0.2676259724 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
13 Hb_114146_010 0.2863856842 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
14 Hb_001934_020 0.3099097134 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
15 Hb_115326_010 0.3344817933 - - -
16 Hb_015836_010 0.3707535104 - - -
17 Hb_006535_010 0.3846597745 - - -
18 Hb_000009_540 0.3909102795 - - hypothetical protein JCGZ_12303 [Jatropha curcas]
19 Hb_003687_180 0.3939130142 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
20 Hb_017214_050 0.4009767507 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_008221_120 Hb_008221_120 Hb_005305_190 Hb_005305_190 Hb_008221_120--Hb_005305_190 Hb_005952_020 Hb_005952_020 Hb_008221_120--Hb_005952_020 Hb_005779_070 Hb_005779_070 Hb_008221_120--Hb_005779_070 Hb_010589_100 Hb_010589_100 Hb_008221_120--Hb_010589_100 Hb_000976_370 Hb_000976_370 Hb_008221_120--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_008221_120--Hb_120112_010 Hb_005305_190--Hb_005779_070 Hb_005305_190--Hb_005952_020 Hb_005305_190--Hb_010589_100 Hb_000445_240 Hb_000445_240 Hb_005305_190--Hb_000445_240 Hb_007140_010 Hb_007140_010 Hb_005305_190--Hb_007140_010 Hb_005952_020--Hb_005779_070 Hb_005952_020--Hb_010589_100 Hb_005952_020--Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_005952_020--Hb_172179_010 Hb_005779_070--Hb_010589_100 Hb_005779_070--Hb_007140_010 Hb_005779_070--Hb_172179_010 Hb_010589_100--Hb_007140_010 Hb_010589_100--Hb_172179_010 Hb_000976_370--Hb_120112_010 Hb_008689_020 Hb_008689_020 Hb_000976_370--Hb_008689_020 Hb_106496_010 Hb_106496_010 Hb_000976_370--Hb_106496_010 Hb_000976_370--Hb_005305_190 Hb_001934_020 Hb_001934_020 Hb_000976_370--Hb_001934_020 Hb_120112_010--Hb_008689_020 Hb_120112_010--Hb_106496_010 Hb_120112_010--Hb_005305_190 Hb_120112_010--Hb_001934_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0652563 0 0.0162861 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0783482 0 0 0

CAGE analysis