Hb_008225_050

Information

Type -
Description -
Location Contig8225: 22171-27256
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa004332mg
description hypothetical protein
nr
ID XP_007209908.1
description hypothetical protein PRUPE_ppa004332mg [Prunus persica]
swissprot
ID P37117
description Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1
trembl
ID M5WBH6
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004332mg PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 71a22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59628: 22188-27399 , PASA_asmbl_59629: 25303-27399
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008225_050 0.0 - - hypothetical protein PRUPE_ppa004332mg [Prunus persica]
2 Hb_007537_040 0.0346816477 - - PREDICTED: uncharacterized protein LOC105803495 [Gossypium raimondii]
3 Hb_000254_130 0.0457133419 - - Photosystem I reaction center subunit VI, chloroplast precursor, putative [Ricinus communis]
4 Hb_003025_160 0.0460102787 - - Protein HVA22, putative [Ricinus communis]
5 Hb_002752_020 0.0461574016 - - FKBP-type peptidyl-prolyl cis-trans isomerase 3 family protein [Populus trichocarpa]
6 Hb_004970_060 0.0530819262 - - PREDICTED: uncharacterized protein LOC100259061 [Vitis vinifera]
7 Hb_001975_100 0.0541453772 - - chlorophyll a-b binding protein 151, chloroplastic [Jatropha curcas]
8 Hb_001999_230 0.0551546333 - - PREDICTED: uncharacterized protein LOC105630678 [Jatropha curcas]
9 Hb_004338_050 0.0603179544 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
10 Hb_000497_050 0.0608298142 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
11 Hb_001735_040 0.0634868244 - - PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
12 Hb_003623_080 0.0638462853 - - PREDICTED: pheophytinase, chloroplastic [Populus euphratica]
13 Hb_002121_050 0.0643212376 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]
14 Hb_003371_080 0.0658740018 - - hypothetical protein POPTR_0001s23660g [Populus trichocarpa]
15 Hb_005063_030 0.0670368942 - - Photosystem II reaction center W protein, chloroplast precursor, putative [Ricinus communis]
16 Hb_000369_110 0.0682658442 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_002259_090 0.0687027896 - - PREDICTED: ABC transporter G family member 11 [Jatropha curcas]
18 Hb_000418_130 0.0691246861 - - PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Jatropha curcas]
19 Hb_002028_020 0.0697455476 - - acyltransferase, putative [Ricinus communis]
20 Hb_146255_030 0.070260242 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5-like [Jatropha curcas]

Gene co-expression network

sample Hb_008225_050 Hb_008225_050 Hb_007537_040 Hb_007537_040 Hb_008225_050--Hb_007537_040 Hb_000254_130 Hb_000254_130 Hb_008225_050--Hb_000254_130 Hb_003025_160 Hb_003025_160 Hb_008225_050--Hb_003025_160 Hb_002752_020 Hb_002752_020 Hb_008225_050--Hb_002752_020 Hb_004970_060 Hb_004970_060 Hb_008225_050--Hb_004970_060 Hb_001975_100 Hb_001975_100 Hb_008225_050--Hb_001975_100 Hb_000369_110 Hb_000369_110 Hb_007537_040--Hb_000369_110 Hb_007537_040--Hb_003025_160 Hb_007537_040--Hb_004970_060 Hb_001735_040 Hb_001735_040 Hb_007537_040--Hb_001735_040 Hb_007537_040--Hb_002752_020 Hb_000254_130--Hb_001975_100 Hb_001999_230 Hb_001999_230 Hb_000254_130--Hb_001999_230 Hb_000254_130--Hb_003025_160 Hb_005063_030 Hb_005063_030 Hb_000254_130--Hb_005063_030 Hb_000254_130--Hb_002752_020 Hb_003025_160--Hb_004970_060 Hb_002259_090 Hb_002259_090 Hb_003025_160--Hb_002259_090 Hb_003025_160--Hb_001999_230 Hb_000497_050 Hb_000497_050 Hb_002752_020--Hb_000497_050 Hb_146255_030 Hb_146255_030 Hb_002752_020--Hb_146255_030 Hb_004032_400 Hb_004032_400 Hb_002752_020--Hb_004032_400 Hb_001277_350 Hb_001277_350 Hb_002752_020--Hb_001277_350 Hb_004338_050 Hb_004338_050 Hb_002752_020--Hb_004338_050 Hb_004970_060--Hb_000254_130 Hb_004970_060--Hb_001999_230 Hb_153258_040 Hb_153258_040 Hb_004970_060--Hb_153258_040 Hb_001975_100--Hb_005063_030 Hb_001006_040 Hb_001006_040 Hb_001975_100--Hb_001006_040 Hb_001292_030 Hb_001292_030 Hb_001975_100--Hb_001292_030 Hb_001564_120 Hb_001564_120 Hb_001975_100--Hb_001564_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.05804 26.1058 16.059 0 0.0102435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0480979 0 0 0.579984 40.1192

CAGE analysis