Hb_008226_010

Information

Type -
Description -
Location Contig8226: 11488-12174
Sequence    

Annotation

kegg
ID rcu:RCOM_0690120
description hypothetical protein
nr
ID XP_012091143.1
description PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ58
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03320 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008226_010 0.0 - - PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]
2 Hb_000134_080 0.0876354981 - - synaptotagmin, putative [Ricinus communis]
3 Hb_000139_060 0.0903065354 - - Photosystem I reaction center subunit II, chloroplast precursor, putative [Ricinus communis]
4 Hb_015234_010 0.1078116111 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
5 Hb_002338_040 0.1137252658 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000260_520 0.1237466198 - - receptor protein kinase, putative [Ricinus communis]
7 Hb_005066_040 0.126815238 - - Reticuline oxidase precursor, putative [Ricinus communis]
8 Hb_008727_060 0.1291690072 - - Beta-glucosidase, putative [Ricinus communis]
9 Hb_022092_070 0.1340857647 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Jatropha curcas]
10 Hb_001276_050 0.1370277242 desease resistance Gene Name: NB-ARC NBS-LRR resistance-like protein 1O [Medicago truncatula]
11 Hb_000661_270 0.1370963193 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
12 Hb_001186_040 0.1379895422 - - Peroxidase 3 precursor, putative [Ricinus communis]
13 Hb_011214_080 0.1397769546 - - sucrose synthase 1 [Hevea brasiliensis]
14 Hb_001488_160 0.1398045555 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
15 Hb_140595_020 0.1408355144 - - PREDICTED: vegetative cell wall protein gp1-like [Solanum lycopersicum]
16 Hb_000230_490 0.1418657188 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002119_150 0.1421450314 - - hypothetical protein POPTR_0008s13870g [Populus trichocarpa]
18 Hb_001657_020 0.1426776469 - - heat shock family protein [Populus trichocarpa]
19 Hb_000920_100 0.1428888489 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_080048_030 0.1445712916 desease resistance Gene Name: NB-ARC Leucine-rich repeat containing protein [Theobroma cacao]

Gene co-expression network

sample Hb_008226_010 Hb_008226_010 Hb_000134_080 Hb_000134_080 Hb_008226_010--Hb_000134_080 Hb_000139_060 Hb_000139_060 Hb_008226_010--Hb_000139_060 Hb_015234_010 Hb_015234_010 Hb_008226_010--Hb_015234_010 Hb_002338_040 Hb_002338_040 Hb_008226_010--Hb_002338_040 Hb_000260_520 Hb_000260_520 Hb_008226_010--Hb_000260_520 Hb_005066_040 Hb_005066_040 Hb_008226_010--Hb_005066_040 Hb_000661_270 Hb_000661_270 Hb_000134_080--Hb_000661_270 Hb_001657_020 Hb_001657_020 Hb_000134_080--Hb_001657_020 Hb_001488_160 Hb_001488_160 Hb_000134_080--Hb_001488_160 Hb_000134_080--Hb_000139_060 Hb_000134_080--Hb_002338_040 Hb_001541_200 Hb_001541_200 Hb_000139_060--Hb_001541_200 Hb_001557_010 Hb_001557_010 Hb_000139_060--Hb_001557_010 Hb_000139_060--Hb_005066_040 Hb_000008_070 Hb_000008_070 Hb_000139_060--Hb_000008_070 Hb_000139_060--Hb_001657_020 Hb_001276_050 Hb_001276_050 Hb_015234_010--Hb_001276_050 Hb_001295_080 Hb_001295_080 Hb_015234_010--Hb_001295_080 Hb_080048_030 Hb_080048_030 Hb_015234_010--Hb_080048_030 Hb_001085_200 Hb_001085_200 Hb_015234_010--Hb_001085_200 Hb_189208_080 Hb_189208_080 Hb_015234_010--Hb_189208_080 Hb_033681_030 Hb_033681_030 Hb_002338_040--Hb_033681_030 Hb_002044_070 Hb_002044_070 Hb_002338_040--Hb_002044_070 Hb_005483_040 Hb_005483_040 Hb_002338_040--Hb_005483_040 Hb_086300_010 Hb_086300_010 Hb_002338_040--Hb_086300_010 Hb_002149_060 Hb_002149_060 Hb_002338_040--Hb_002149_060 Hb_002329_050 Hb_002329_050 Hb_002338_040--Hb_002329_050 Hb_140595_020 Hb_140595_020 Hb_000260_520--Hb_140595_020 Hb_001104_070 Hb_001104_070 Hb_000260_520--Hb_001104_070 Hb_005062_100 Hb_005062_100 Hb_000260_520--Hb_005062_100 Hb_140595_030 Hb_140595_030 Hb_000260_520--Hb_140595_030 Hb_018487_040 Hb_018487_040 Hb_000260_520--Hb_018487_040 Hb_002119_150 Hb_002119_150 Hb_000260_520--Hb_002119_150 Hb_005843_010 Hb_005843_010 Hb_005066_040--Hb_005843_010 Hb_009315_010 Hb_009315_010 Hb_005066_040--Hb_009315_010 Hb_022092_070 Hb_022092_070 Hb_005066_040--Hb_022092_070 Hb_005066_040--Hb_002119_150 Hb_008518_060 Hb_008518_060 Hb_005066_040--Hb_008518_060 Hb_000739_280 Hb_000739_280 Hb_005066_040--Hb_000739_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.845534 5.27134 9.5809 29.6469 0.539788 2.24839
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.249155 0.065288 0.116244 0.611483 67.3736

CAGE analysis