Hb_008304_010

Information

Type -
Description -
Location Contig8304: 3404-5928
Sequence    

Annotation

kegg
ID fve:101299142
description LRR receptor-like serine/threonine-protein kinase EFR-like
nr
ID XP_004308937.2
description PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008304_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
2 Hb_004602_010 0.0815279671 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
3 Hb_003938_230 0.0828198997 - - Potassium transporter, putative [Ricinus communis]
4 Hb_062807_010 0.0899694259 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
5 Hb_004218_140 0.0910609381 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]
6 Hb_001488_420 0.0915182181 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
7 Hb_004592_010 0.0928675435 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]
8 Hb_000008_150 0.0953897933 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
9 Hb_121313_010 0.0976109515 - - PREDICTED: endoglucanase 24-like [Jatropha curcas]
10 Hb_004122_010 0.1009190223 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
11 Hb_000627_040 0.1014132566 - - leucine-rich repeat protein, putative [Ricinus communis]
12 Hb_000739_170 0.1038298242 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
13 Hb_002518_040 0.1050604881 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
14 Hb_005892_050 0.1061416016 - - PREDICTED: uncharacterized protein LOC105632175 [Jatropha curcas]
15 Hb_003666_070 0.1064233144 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
16 Hb_005675_050 0.106829024 - - alpha-glucosidase, putative [Ricinus communis]
17 Hb_007632_160 0.1068933837 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005730_110 0.1114035135 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
19 Hb_000120_340 0.1128797812 - - Cucumisin precursor, putative [Ricinus communis]
20 Hb_007237_020 0.113205967 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]

Gene co-expression network

sample Hb_008304_010 Hb_008304_010 Hb_004602_010 Hb_004602_010 Hb_008304_010--Hb_004602_010 Hb_003938_230 Hb_003938_230 Hb_008304_010--Hb_003938_230 Hb_062807_010 Hb_062807_010 Hb_008304_010--Hb_062807_010 Hb_004218_140 Hb_004218_140 Hb_008304_010--Hb_004218_140 Hb_001488_420 Hb_001488_420 Hb_008304_010--Hb_001488_420 Hb_004592_010 Hb_004592_010 Hb_008304_010--Hb_004592_010 Hb_000759_040 Hb_000759_040 Hb_004602_010--Hb_000759_040 Hb_004602_010--Hb_004218_140 Hb_005892_050 Hb_005892_050 Hb_004602_010--Hb_005892_050 Hb_000008_150 Hb_000008_150 Hb_004602_010--Hb_000008_150 Hb_004602_010--Hb_001488_420 Hb_002835_310 Hb_002835_310 Hb_003938_230--Hb_002835_310 Hb_001516_010 Hb_001516_010 Hb_003938_230--Hb_001516_010 Hb_002822_010 Hb_002822_010 Hb_003938_230--Hb_002822_010 Hb_003938_230--Hb_001488_420 Hb_003938_230--Hb_000008_150 Hb_001439_050 Hb_001439_050 Hb_062807_010--Hb_001439_050 Hb_003101_020 Hb_003101_020 Hb_062807_010--Hb_003101_020 Hb_108576_020 Hb_108576_020 Hb_062807_010--Hb_108576_020 Hb_062807_010--Hb_004602_010 Hb_007313_030 Hb_007313_030 Hb_062807_010--Hb_007313_030 Hb_004218_140--Hb_001488_420 Hb_121313_010 Hb_121313_010 Hb_004218_140--Hb_121313_010 Hb_004218_140--Hb_005892_050 Hb_000627_040 Hb_000627_040 Hb_004218_140--Hb_000627_040 Hb_004855_080 Hb_004855_080 Hb_001488_420--Hb_004855_080 Hb_001488_420--Hb_000008_150 Hb_001488_420--Hb_000759_040 Hb_003506_010 Hb_003506_010 Hb_001488_420--Hb_003506_010 Hb_019570_010 Hb_019570_010 Hb_004592_010--Hb_019570_010 Hb_003666_070 Hb_003666_070 Hb_004592_010--Hb_003666_070 Hb_005730_110 Hb_005730_110 Hb_004592_010--Hb_005730_110 Hb_000732_220 Hb_000732_220 Hb_004592_010--Hb_000732_220 Hb_000359_180 Hb_000359_180 Hb_004592_010--Hb_000359_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.175471 1.77605 1.22727 0.0167199 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.336256 0.913197

CAGE analysis