Hb_008441_010

Information

Type -
Description -
Location Contig8441: 3-341
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008441_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_000809_010 0.0599339333 - - hypothetical protein JCGZ_12342 [Jatropha curcas]
3 Hb_000654_020 0.0767217135 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
4 Hb_041139_010 0.0876506362 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
5 Hb_008253_050 0.0995726446 transcription factor TF Family: MYB hypothetical protein POPTR_0001s36220g [Populus trichocarpa]
6 Hb_001104_220 0.1005413814 - - PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
7 Hb_002073_130 0.1011528053 - - PREDICTED: uncharacterized protein LOC100246830 [Vitis vinifera]
8 Hb_001277_010 0.1088818946 - - unknown [Populus trichocarpa]
9 Hb_005539_150 0.1140874812 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 33 [Jatropha curcas]
10 Hb_010883_160 0.1146074327 - - PREDICTED: pathogenesis-related protein 5 isoform X1 [Jatropha curcas]
11 Hb_004943_020 0.1146304928 - - cationic amino acid transporter, putative [Ricinus communis]
12 Hb_007163_110 0.1156336044 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
13 Hb_003855_060 0.1178247078 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
14 Hb_000670_070 0.1201510052 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
15 Hb_011501_020 0.1233179868 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
16 Hb_000076_240 0.1249618213 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
17 Hb_132880_010 0.1254282373 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
18 Hb_000477_090 0.127654083 - - PREDICTED: uncharacterized protein LOC105639302 [Jatropha curcas]
19 Hb_172426_070 0.1285752666 - - PREDICTED: BAG family molecular chaperone regulator 3-like isoform X1 [Jatropha curcas]
20 Hb_025623_010 0.12943116 - - -

Gene co-expression network

sample Hb_008441_010 Hb_008441_010 Hb_000809_010 Hb_000809_010 Hb_008441_010--Hb_000809_010 Hb_000654_020 Hb_000654_020 Hb_008441_010--Hb_000654_020 Hb_041139_010 Hb_041139_010 Hb_008441_010--Hb_041139_010 Hb_008253_050 Hb_008253_050 Hb_008441_010--Hb_008253_050 Hb_001104_220 Hb_001104_220 Hb_008441_010--Hb_001104_220 Hb_002073_130 Hb_002073_130 Hb_008441_010--Hb_002073_130 Hb_000809_010--Hb_000654_020 Hb_010883_160 Hb_010883_160 Hb_000809_010--Hb_010883_160 Hb_000809_010--Hb_002073_130 Hb_132880_010 Hb_132880_010 Hb_000809_010--Hb_132880_010 Hb_000076_240 Hb_000076_240 Hb_000809_010--Hb_000076_240 Hb_000654_020--Hb_010883_160 Hb_005539_150 Hb_005539_150 Hb_000654_020--Hb_005539_150 Hb_002245_060 Hb_002245_060 Hb_000654_020--Hb_002245_060 Hb_000402_060 Hb_000402_060 Hb_000654_020--Hb_000402_060 Hb_041139_010--Hb_008253_050 Hb_011618_010 Hb_011618_010 Hb_041139_010--Hb_011618_010 Hb_002001_030 Hb_002001_030 Hb_041139_010--Hb_002001_030 Hb_001894_100 Hb_001894_100 Hb_041139_010--Hb_001894_100 Hb_172426_070 Hb_172426_070 Hb_041139_010--Hb_172426_070 Hb_008253_050--Hb_011618_010 Hb_008253_050--Hb_001894_100 Hb_005348_050 Hb_005348_050 Hb_008253_050--Hb_005348_050 Hb_000223_090 Hb_000223_090 Hb_008253_050--Hb_000223_090 Hb_008253_050--Hb_005539_150 Hb_005622_040 Hb_005622_040 Hb_001104_220--Hb_005622_040 Hb_001277_010 Hb_001277_010 Hb_001104_220--Hb_001277_010 Hb_001104_220--Hb_008253_050 Hb_001104_220--Hb_041139_010 Hb_032143_010 Hb_032143_010 Hb_001104_220--Hb_032143_010 Hb_002073_130--Hb_132880_010 Hb_001593_040 Hb_001593_040 Hb_002073_130--Hb_001593_040 Hb_064445_020 Hb_064445_020 Hb_002073_130--Hb_064445_020 Hb_002073_130--Hb_010883_160 Hb_003151_020 Hb_003151_020 Hb_002073_130--Hb_003151_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.387916 0.890355 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0988461 1.0879

CAGE analysis