Hb_008503_020

Information

Type -
Description -
Location Contig8503: 32281-34969
Sequence    

Annotation

kegg
ID rcu:RCOM_1549500
description transferase, transferring glycosyl groups, putative
nr
ID XP_002515719.1
description transferase, transferring glycosyl groups, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RPQ0
description Transferase, transferring glycosyl groups, putative OS=Ricinus communis GN=RCOM_1549500 PE=4 SV=1
Gene Ontology
ID GO:0016740
description transferring glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60406: 32276-34870
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008503_020 0.0 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
2 Hb_001489_030 0.0926623157 - - PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Jatropha curcas]
3 Hb_001709_070 0.0988429 - - carbohydrate binding protein, putative [Ricinus communis]
4 Hb_003086_200 0.1006831103 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
5 Hb_012053_030 0.1026319782 - - PREDICTED: GDSL esterase/lipase At5g22810 [Jatropha curcas]
6 Hb_001864_010 0.1038787671 - - conserved hypothetical protein [Ricinus communis]
7 Hb_008053_070 0.1051564979 - - PREDICTED: U-box domain-containing protein 33-like isoform X4 [Jatropha curcas]
8 Hb_000300_570 0.1058182827 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
9 Hb_000556_200 0.1094370399 - - PREDICTED: AT-hook motif nuclear-localized protein 22 [Jatropha curcas]
10 Hb_151364_010 0.1143754797 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
11 Hb_002007_230 0.116845258 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]
12 Hb_017987_040 0.1180888197 transcription factor TF Family: MYB hypothetical protein POPTR_0002s11440g [Populus trichocarpa]
13 Hb_004162_040 0.1221204853 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
14 Hb_000265_010 0.1240067573 - - amino acid transporter, putative [Ricinus communis]
15 Hb_000043_080 0.1252749148 - - lipid binding protein, putative [Ricinus communis]
16 Hb_005797_030 0.1263566801 - - PREDICTED: MATE efflux family protein LAL5-like [Jatropha curcas]
17 Hb_007666_040 0.1288966882 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
18 Hb_001596_040 0.1328374077 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]
19 Hb_000221_170 0.1342300898 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
20 Hb_005550_070 0.1351257446 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Populus euphratica]

Gene co-expression network

sample Hb_008503_020 Hb_008503_020 Hb_001489_030 Hb_001489_030 Hb_008503_020--Hb_001489_030 Hb_001709_070 Hb_001709_070 Hb_008503_020--Hb_001709_070 Hb_003086_200 Hb_003086_200 Hb_008503_020--Hb_003086_200 Hb_012053_030 Hb_012053_030 Hb_008503_020--Hb_012053_030 Hb_001864_010 Hb_001864_010 Hb_008503_020--Hb_001864_010 Hb_008053_070 Hb_008053_070 Hb_008503_020--Hb_008053_070 Hb_000043_080 Hb_000043_080 Hb_001489_030--Hb_000043_080 Hb_000300_570 Hb_000300_570 Hb_001489_030--Hb_000300_570 Hb_002917_030 Hb_002917_030 Hb_001489_030--Hb_002917_030 Hb_000265_010 Hb_000265_010 Hb_001489_030--Hb_000265_010 Hb_001489_030--Hb_012053_030 Hb_004162_040 Hb_004162_040 Hb_001709_070--Hb_004162_040 Hb_124385_010 Hb_124385_010 Hb_001709_070--Hb_124385_010 Hb_000221_170 Hb_000221_170 Hb_001709_070--Hb_000221_170 Hb_029508_030 Hb_029508_030 Hb_001709_070--Hb_029508_030 Hb_001623_470 Hb_001623_470 Hb_001709_070--Hb_001623_470 Hb_002007_230 Hb_002007_230 Hb_003086_200--Hb_002007_230 Hb_003086_200--Hb_000265_010 Hb_005797_030 Hb_005797_030 Hb_003086_200--Hb_005797_030 Hb_003086_200--Hb_000043_080 Hb_003086_200--Hb_000300_570 Hb_003086_200--Hb_012053_030 Hb_012053_030--Hb_000300_570 Hb_012053_030--Hb_000265_010 Hb_012053_030--Hb_008053_070 Hb_000185_060 Hb_000185_060 Hb_012053_030--Hb_000185_060 Hb_007666_040 Hb_007666_040 Hb_012053_030--Hb_007666_040 Hb_001864_010--Hb_005797_030 Hb_001864_010--Hb_029508_030 Hb_001864_010--Hb_002007_230 Hb_001864_010--Hb_000221_170 Hb_000286_190 Hb_000286_190 Hb_001864_010--Hb_000286_190 Hb_008616_020 Hb_008616_020 Hb_008053_070--Hb_008616_020 Hb_008053_070--Hb_000185_060 Hb_032582_010 Hb_032582_010 Hb_008053_070--Hb_032582_010 Hb_002677_010 Hb_002677_010 Hb_008053_070--Hb_002677_010 Hb_001376_040 Hb_001376_040 Hb_008053_070--Hb_001376_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.67616 0.421713 0.194076 0 0.00836585
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0217249 0.017094 0 10.0483 0.614748

CAGE analysis