Hb_008511_010

Information

Type -
Description -
Location Contig8511: 22969-25777
Sequence    

Annotation

kegg
ID rcu:RCOM_1674920
description somatic embryogenesis receptor kinase, putative (EC:2.7.11.30)
nr
ID XP_012069889.1
description PREDICTED: putative proline-rich receptor-like protein kinase PERK6 [Jatropha curcas]
swissprot
ID Q9XI96
description Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana GN=PERK7 PE=2 SV=1
trembl
ID A0A067LG39
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10083 PE=3 SV=1
Gene Ontology
ID GO:0004672
description proline-rich receptor-like protein kinase perk6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008511_010 0.0 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK6 [Jatropha curcas]
2 Hb_000000_100 0.2554606002 - - hypothetical protein POPTR_0002s13260g [Populus trichocarpa]
3 Hb_181909_010 0.2743431323 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
4 Hb_001976_080 0.2778911401 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
5 Hb_055101_010 0.2812182841 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_005439_040 0.2841456709 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
7 Hb_000637_120 0.2916832757 - - PREDICTED: aspartic proteinase Asp1 [Jatropha curcas]
8 Hb_115791_020 0.2975261863 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
9 Hb_001387_030 0.3135721729 transcription factor TF Family: ERF hypothetical protein POPTR_0013s13920g [Populus trichocarpa]
10 Hb_007590_070 0.3178700115 - - PREDICTED: inositol 3-kinase [Jatropha curcas]
11 Hb_017434_060 0.3206548132 - - PREDICTED: 60S ribosomal export protein NMD3 [Jatropha curcas]
12 Hb_000500_140 0.3269066554 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 4 [Jatropha curcas]
13 Hb_000067_010 0.3274348408 - - hypothetical protein B456_002G147500 [Gossypium raimondii]
14 Hb_000251_090 0.3338709882 - - PREDICTED: two-pore potassium channel 3-like [Jatropha curcas]
15 Hb_003861_020 0.3341566981 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like isoform X2 [Nelumbo nucifera]
16 Hb_161072_010 0.3341886465 - - -
17 Hb_052689_010 0.3343011093 - - heat shock cognate protein [Solanum commersonii]
18 Hb_000192_110 0.3375151617 - - PREDICTED: uncharacterized protein LOC105646856 [Jatropha curcas]
19 Hb_003609_020 0.3375381397 desease resistance Gene Name: Clusterin hypothetical protein CISIN_1g001897mg [Citrus sinensis]
20 Hb_130194_010 0.3397154466 - - PREDICTED: uncharacterized protein LOC104115665 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_008511_010 Hb_008511_010 Hb_000000_100 Hb_000000_100 Hb_008511_010--Hb_000000_100 Hb_181909_010 Hb_181909_010 Hb_008511_010--Hb_181909_010 Hb_001976_080 Hb_001976_080 Hb_008511_010--Hb_001976_080 Hb_055101_010 Hb_055101_010 Hb_008511_010--Hb_055101_010 Hb_005439_040 Hb_005439_040 Hb_008511_010--Hb_005439_040 Hb_000637_120 Hb_000637_120 Hb_008511_010--Hb_000637_120 Hb_004103_030 Hb_004103_030 Hb_000000_100--Hb_004103_030 Hb_000304_060 Hb_000304_060 Hb_000000_100--Hb_000304_060 Hb_000000_100--Hb_001976_080 Hb_008494_050 Hb_008494_050 Hb_000000_100--Hb_008494_050 Hb_000251_090 Hb_000251_090 Hb_000000_100--Hb_000251_090 Hb_132915_010 Hb_132915_010 Hb_181909_010--Hb_132915_010 Hb_007380_010 Hb_007380_010 Hb_181909_010--Hb_007380_010 Hb_000190_100 Hb_000190_100 Hb_181909_010--Hb_000190_100 Hb_000192_110 Hb_000192_110 Hb_181909_010--Hb_000192_110 Hb_007537_010 Hb_007537_010 Hb_181909_010--Hb_007537_010 Hb_001976_080--Hb_000304_060 Hb_001976_080--Hb_000192_110 Hb_015970_010 Hb_015970_010 Hb_001976_080--Hb_015970_010 Hb_108886_010 Hb_108886_010 Hb_001976_080--Hb_108886_010 Hb_004785_140 Hb_004785_140 Hb_055101_010--Hb_004785_140 Hb_000990_060 Hb_000990_060 Hb_055101_010--Hb_000990_060 Hb_002205_190 Hb_002205_190 Hb_055101_010--Hb_002205_190 Hb_080952_010 Hb_080952_010 Hb_055101_010--Hb_080952_010 Hb_000362_120 Hb_000362_120 Hb_055101_010--Hb_000362_120 Hb_002496_040 Hb_002496_040 Hb_055101_010--Hb_002496_040 Hb_082182_010 Hb_082182_010 Hb_005439_040--Hb_082182_010 Hb_001565_110 Hb_001565_110 Hb_005439_040--Hb_001565_110 Hb_002486_010 Hb_002486_010 Hb_005439_040--Hb_002486_010 Hb_043485_010 Hb_043485_010 Hb_005439_040--Hb_043485_010 Hb_000500_140 Hb_000500_140 Hb_005439_040--Hb_000500_140 Hb_007747_140 Hb_007747_140 Hb_005439_040--Hb_007747_140 Hb_149539_010 Hb_149539_010 Hb_000637_120--Hb_149539_010 Hb_006816_450 Hb_006816_450 Hb_000637_120--Hb_006816_450 Hb_161072_010 Hb_161072_010 Hb_000637_120--Hb_161072_010 Hb_000436_010 Hb_000436_010 Hb_000637_120--Hb_000436_010 Hb_001100_010 Hb_001100_010 Hb_000637_120--Hb_001100_010 Hb_001799_080 Hb_001799_080 Hb_000637_120--Hb_001799_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0841863 0.121892 0 0 0.00912333 0.0347515
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0206971 0 0.24756 0.110067 0.0344933

CAGE analysis