Hb_008511_050

Information

Type -
Description -
Location Contig8511: 48944-55972
Sequence    

Annotation

kegg
ID rcu:RCOM_1675080
description adenylyl cyclase-associated protein, putative
nr
ID XP_012069926.1
description PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
swissprot
ID O65902
description Cyclase-associated protein 1 OS=Arabidopsis thaliana GN=CAP1 PE=2 SV=1
trembl
ID A0A067LD01
description Adenylyl cyclase-associated protein OS=Jatropha curcas GN=JCGZ_10087 PE=3 SV=1
Gene Ontology
ID GO:0003779
description adenylyl cyclase-associated protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60415: 49109-55850 , PASA_asmbl_60416: 50093-50373 , PASA_asmbl_60417: 50663-50920
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008511_050 0.0 - - PREDICTED: cyclase-associated protein 1 [Jatropha curcas]
2 Hb_003195_060 0.074262381 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
3 Hb_007192_080 0.0815842646 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]
4 Hb_006332_010 0.0904388032 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 isoform X1 [Vitis vinifera]
5 Hb_002200_130 0.0948956477 - - PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Jatropha curcas]
6 Hb_050455_010 0.1003237257 - - PREDICTED: prosaposin isoform X2 [Jatropha curcas]
7 Hb_023344_030 0.1013548119 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
8 Hb_005170_040 0.1015694993 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
9 Hb_000069_160 0.1038180394 - - -
10 Hb_000364_010 0.1042879474 - - putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus domestica]
11 Hb_000608_030 0.1044358887 - - hypothetical protein JCGZ_18019 [Jatropha curcas]
12 Hb_000977_310 0.1082404791 - - PREDICTED: gamma-tubulin complex component 2 isoform X4 [Jatropha curcas]
13 Hb_001301_200 0.1096410862 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
14 Hb_000384_090 0.1106570375 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
15 Hb_000229_040 0.111643592 - - Secretory carrier membrane protein (SCAMP) family protein isoform 2 [Theobroma cacao]
16 Hb_000390_060 0.1130053266 - - PREDICTED: F-box/kelch-repeat protein At5g60570-like [Jatropha curcas]
17 Hb_000207_390 0.1132280065 - - PREDICTED: uncharacterized protein LOC105637143 [Jatropha curcas]
18 Hb_003195_070 0.1133090577 - - Uncharacterized protein isoform 1 [Theobroma cacao]
19 Hb_021409_020 0.1148557853 - - PREDICTED: protein yippee-like At4g27745 [Malus domestica]
20 Hb_004447_060 0.1154538738 - - PREDICTED: uncharacterized protein LOC105636329 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008511_050 Hb_008511_050 Hb_003195_060 Hb_003195_060 Hb_008511_050--Hb_003195_060 Hb_007192_080 Hb_007192_080 Hb_008511_050--Hb_007192_080 Hb_006332_010 Hb_006332_010 Hb_008511_050--Hb_006332_010 Hb_002200_130 Hb_002200_130 Hb_008511_050--Hb_002200_130 Hb_050455_010 Hb_050455_010 Hb_008511_050--Hb_050455_010 Hb_023344_030 Hb_023344_030 Hb_008511_050--Hb_023344_030 Hb_002609_110 Hb_002609_110 Hb_003195_060--Hb_002609_110 Hb_003195_070 Hb_003195_070 Hb_003195_060--Hb_003195_070 Hb_002811_360 Hb_002811_360 Hb_003195_060--Hb_002811_360 Hb_003195_060--Hb_006332_010 Hb_005754_060 Hb_005754_060 Hb_003195_060--Hb_005754_060 Hb_007192_080--Hb_003195_060 Hb_001866_110 Hb_001866_110 Hb_007192_080--Hb_001866_110 Hb_009535_020 Hb_009535_020 Hb_007192_080--Hb_009535_020 Hb_007192_080--Hb_002200_130 Hb_000014_150 Hb_000014_150 Hb_007192_080--Hb_000014_150 Hb_004447_060 Hb_004447_060 Hb_006332_010--Hb_004447_060 Hb_007163_090 Hb_007163_090 Hb_006332_010--Hb_007163_090 Hb_148644_010 Hb_148644_010 Hb_006332_010--Hb_148644_010 Hb_006332_010--Hb_002811_360 Hb_004767_100 Hb_004767_100 Hb_006332_010--Hb_004767_100 Hb_001301_200 Hb_001301_200 Hb_006332_010--Hb_001301_200 Hb_000207_390 Hb_000207_390 Hb_002200_130--Hb_000207_390 Hb_003362_040 Hb_003362_040 Hb_002200_130--Hb_003362_040 Hb_002200_130--Hb_001301_200 Hb_000048_140 Hb_000048_140 Hb_002200_130--Hb_000048_140 Hb_028639_010 Hb_028639_010 Hb_002200_130--Hb_028639_010 Hb_001797_050 Hb_001797_050 Hb_002200_130--Hb_001797_050 Hb_000069_160 Hb_000069_160 Hb_050455_010--Hb_000069_160 Hb_002982_040 Hb_002982_040 Hb_050455_010--Hb_002982_040 Hb_003847_080 Hb_003847_080 Hb_050455_010--Hb_003847_080 Hb_185830_020 Hb_185830_020 Hb_050455_010--Hb_185830_020 Hb_012305_050 Hb_012305_050 Hb_050455_010--Hb_012305_050 Hb_000849_070 Hb_000849_070 Hb_050455_010--Hb_000849_070 Hb_023344_030--Hb_001301_200 Hb_023344_030--Hb_007163_090 Hb_007059_010 Hb_007059_010 Hb_023344_030--Hb_007059_010 Hb_004032_150 Hb_004032_150 Hb_023344_030--Hb_004032_150 Hb_000051_070 Hb_000051_070 Hb_023344_030--Hb_000051_070 Hb_005170_040 Hb_005170_040 Hb_023344_030--Hb_005170_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
58.7634 42.5357 16.3342 68.4831 93.793 163.906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
74.7227 51.7455 95.1433 34.4626 26.4451

CAGE analysis