Hb_008692_010

Information

Type -
Description -
Location Contig8692: 1684-4031
Sequence    

Annotation

kegg
ID rcu:RCOM_0937520
description sugar transporter, putative (EC:1.3.1.74)
nr
ID CAP58707.1
description putative polyol transported protein 2 [Hevea brasiliensis]
swissprot
ID Q8VZ80
description Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2
trembl
ID B0RZ59
description Putative polyol transported protein 2 OS=Hevea brasiliensis GN=plt2 PE=2 SV=1
Gene Ontology
ID GO:0016021
description polyol transporter 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61086: 3049-3233
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008692_010 0.0 - - putative polyol transported protein 2 [Hevea brasiliensis]
2 Hb_018591_050 0.109455842 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
3 Hb_025526_010 0.1139732721 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
4 Hb_000740_130 0.1229852746 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
5 Hb_007894_260 0.1238215345 - - receptor protein kinase, putative [Ricinus communis]
6 Hb_000101_360 0.1276801201 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
7 Hb_003060_080 0.1325016178 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
8 Hb_000077_330 0.1341945607 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
9 Hb_009785_010 0.1368168792 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
10 Hb_014037_010 0.1368702873 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]
11 Hb_006569_110 0.1420292747 - - conserved hypothetical protein [Ricinus communis]
12 Hb_056101_010 0.1449425362 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
13 Hb_004884_200 0.1457305028 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
14 Hb_006788_150 0.1502409829 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000010_200 0.1537122925 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000661_230 0.1542575021 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
17 Hb_006938_010 0.1555964788 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_000412_060 0.1565835562 - - hypothetical protein JCGZ_18814 [Jatropha curcas]
19 Hb_001504_220 0.1582824516 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_004881_060 0.1598661411 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]

Gene co-expression network

sample Hb_008692_010 Hb_008692_010 Hb_018591_050 Hb_018591_050 Hb_008692_010--Hb_018591_050 Hb_025526_010 Hb_025526_010 Hb_008692_010--Hb_025526_010 Hb_000740_130 Hb_000740_130 Hb_008692_010--Hb_000740_130 Hb_007894_260 Hb_007894_260 Hb_008692_010--Hb_007894_260 Hb_000101_360 Hb_000101_360 Hb_008692_010--Hb_000101_360 Hb_003060_080 Hb_003060_080 Hb_008692_010--Hb_003060_080 Hb_000077_330 Hb_000077_330 Hb_018591_050--Hb_000077_330 Hb_018591_050--Hb_025526_010 Hb_018591_050--Hb_007894_260 Hb_000412_060 Hb_000412_060 Hb_018591_050--Hb_000412_060 Hb_018591_050--Hb_003060_080 Hb_006788_150 Hb_006788_150 Hb_025526_010--Hb_006788_150 Hb_056101_010 Hb_056101_010 Hb_025526_010--Hb_056101_010 Hb_000661_230 Hb_000661_230 Hb_025526_010--Hb_000661_230 Hb_000422_020 Hb_000422_020 Hb_025526_010--Hb_000422_020 Hb_004881_060 Hb_004881_060 Hb_025526_010--Hb_004881_060 Hb_025526_010--Hb_003060_080 Hb_182021_010 Hb_182021_010 Hb_000740_130--Hb_182021_010 Hb_000844_100 Hb_000844_100 Hb_000740_130--Hb_000844_100 Hb_088916_010 Hb_088916_010 Hb_000740_130--Hb_088916_010 Hb_132515_010 Hb_132515_010 Hb_000740_130--Hb_132515_010 Hb_054865_030 Hb_054865_030 Hb_000740_130--Hb_054865_030 Hb_006569_110 Hb_006569_110 Hb_007894_260--Hb_006569_110 Hb_006938_010 Hb_006938_010 Hb_007894_260--Hb_006938_010 Hb_007894_260--Hb_003060_080 Hb_000010_200 Hb_000010_200 Hb_007894_260--Hb_000010_200 Hb_000381_030 Hb_000381_030 Hb_007894_260--Hb_000381_030 Hb_000920_360 Hb_000920_360 Hb_007894_260--Hb_000920_360 Hb_002542_090 Hb_002542_090 Hb_000101_360--Hb_002542_090 Hb_000101_360--Hb_000010_200 Hb_000101_360--Hb_025526_010 Hb_002928_220 Hb_002928_220 Hb_000101_360--Hb_002928_220 Hb_000101_360--Hb_007894_260 Hb_003060_080--Hb_006569_110 Hb_006970_100 Hb_006970_100 Hb_003060_080--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_003060_080--Hb_006651_010 Hb_003060_080--Hb_006938_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.987338 29.7879 4.90979 8.37135 0.242758 0.455731
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.6715 0.603336 0.257747 77.8507 19.5287

CAGE analysis